Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi8g00095 ATGGCTTCTCGTGAAAACTTCGTCTATGTGGCCAAGCTTGCCGAACAAGCTGAACGCTACGATGAAATGGTGGATGCCATGAAGAAGGTGGCGCAGATGGACGTTGAGTTGAGTGTGGAAGAAAGAAACTTGTTTTCTGTTGGGTACAAGAATGTGGTGGGGTCCCGGAGAGCTTCGTGGAGGATCCTTTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGGTGAATGTTAAGCGTATCAGGGAGTACATGCAGAAGGTGGAGTTGGAGCTGTCCAACATTTGCAATGACATTATGATAGTTTTAGATGAGCATCTTATTCCATCCACTAATGTTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGATTATTACCGGTATTTAGCTGAATTCAAAGCTGGTAATGAAAAGAAAGAGGTAGCAGATCAGTCACTGAAAGCATATCAGACAGCTTCTGCCACTGCTGAGAGTGAATTACAGCCTACACATCCTATCCGATTGGGTCTAGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCACCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTGGATACCCTGAATGAGGAATCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGAGAGACAACCTTACTTTATGGACTTCTGATATCCCAGAAGATGGTGGACTTCACAATCTTTCTCGCCATTTCTCTACCCAATTCACCATTGTCATTGAAGAATTCCAAGGGATGTCCAGAAACCAAGTTTTTGAGGCAGCAGAAGCCTATTTAGGCACTAAAGCCACTCTCTCAACTCAGAGAGTTAAAGCAAGCAAATCTGAGGATGATAAAAACCTTTCATTTGGTTTAGATAGAGATGAAGAAGTGAGTGATGAATTTGAAGGTGTTAGATTAACTTGGAAACTTATGTATATCCAAGTTGAGTCATCTCATAGACATACTCATGATATGAACATGTCTTCACAATCAGAACTAAGATACTATGAACTAAGCTTTCACAAGAAACACAAGGAGAAAATCTTCAATTCATATTTGCCATATGTTTTGGAGAGAGCCAAGGCTATTAAACAAGAAAACATGGCAGTGAAGCTTCACACAGTTGAATATGAGTACTGGTGTGGACAAGCTGTTAAATTTGATCATCCAATGAGTTTCAAGACTCTTGCAATTGATGCTGAGATTAAAAGGGAATTAGTGAATGATTTGGACAGGTTTATAAAAGGGAAGGAGTTCTATAGAAGAACTGGGAAAGCTTGGAAACGTGGTTACTTGTTGTATGGTCCTCCTGGAACTGGCAAATCTAGCTTAATTGCAGCCATTGCCAACTATCTCAACTATGATATCTATGACTTGGATCTCACAGGTGTACATGATAATAAGAGCTTAAAGAATCTTCTCCTTGGCATGTCTAACCGTTCCATACTTGTGATAGAGGATATTGACTGCACTATAAAGCTTCAGAACAGAGAAGAAGATAAGGAAGTGGAAGTGGATGATAATGGATACAATAAGGTGACACTTTCAGGACTTTTGAATGTTATAGATGGGCTTTGGTCATGCTGTGGAGAGGAACGCATCATTATTTTTACAACCAATCATAAAGAAAGGCTTGACCCTGCTCTGCTAAGGCCTGGCCGGATGGACATGCATATTCACTTGTCATACTGTACCTTTTCTGCTTTTGAGCAATTGGCTTTGAACTACCTTGGCATTTCTCAACACAAACTCTTTGAACAAATTGAAGGGCTTCTAAGAGAAGTCCAAGTGACTCCAGCAGAATTTGCAGGAGAGCTAATAAAGATTGCTGATGCTAGCGAATGCCTACAAGACCTTGTCAAATTCCTCCATGACAAGAAAATGCTCAAGGGCGAGACTGAAAGTGACCAGAATATCAAAGAGGATCATGAACTAGGTGGAGAAAAATTGTGA 1983 0.407 MASRENFVYVAKLAEQAERYDEMVDAMKKVAQMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNEVNVKRIREYMQKVELELSNICNDIMIVLDEHLIPSTNVAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTASATAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGGLHNLSRHFSTQFTIVIEEFQGMSRNQVFEAAEAYLGTKATLSTQRVKASKSEDDKNLSFGLDRDEEVSDEFEGVRLTWKLMYIQVESSHRHTHDMNMSSQSELRYYELSFHKKHKEKIFNSYLPYVLERAKAIKQENMAVKLHTVEYEYWCGQAVKFDHPMSFKTLAIDAEIKRELVNDLDRFIKGKEFYRRTGKAWKRGYLLYGPPGTGKSSLIAAIANYLNYDIYDLDLTGVHDNKSLKNLLLGMSNRSILVIEDIDCTIKLQNREEDKEVEVDDNGYNKVTLSGLLNVIDGLWSCCGEERIIIFTTNHKERLDPALLRPGRMDMHIHLSYCTFSAFEQLALNYLGISQHKLFEQIEGLLREVQVTPAEFAGELIKIADASECLQDLVKFLHDKKMLKGETESDQNIKEDHELGGEKL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi8g00095 660 Pfam Domain associated at C-terminal with AAA 244 320 IPR025753 -
Sebi8g00095 660 Gene3D - 570 640 - -
Sebi8g00095 660 SMART 1433_4 4 245 IPR023410 -
Sebi8g00095 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 627 IPR027417 -
Sebi8g00095 660 PRINTS 14-3-3 protein zeta signature 85 109 IPR000308 -
Sebi8g00095 660 PRINTS 14-3-3 protein zeta signature 116 138 IPR000308 -
Sebi8g00095 660 PRINTS 14-3-3 protein zeta signature 205 234 IPR000308 -
Sebi8g00095 660 PRINTS 14-3-3 protein zeta signature 178 204 IPR000308 -
Sebi8g00095 660 PRINTS 14-3-3 protein zeta signature 36 65 IPR000308 -
Sebi8g00095 660 PRINTS 14-3-3 protein zeta signature 151 177 IPR000308 -
Sebi8g00095 660 PANTHER BCS1 AAA-TYPE ATPASE 244 638 - -
Sebi8g00095 660 Gene3D - 1 242 IPR036815 -
Sebi8g00095 660 SUPERFAMILY 14-3-3 protein 1 234 IPR036815 -
Sebi8g00095 660 Pfam 14-3-3 protein 11 232 IPR023410 -
Sebi8g00095 660 ProSitePatterns AAA-protein family signature. 543 561 IPR003960 GO:0005524|GO:0016887
Sebi8g00095 660 Gene3D - 392 569 IPR027417 -
Sebi8g00095 660 SMART AAA_5 437 575 IPR003593 GO:0016887
Sebi8g00095 660 Pfam ATPase family associated with various cellular activities (AAA) 442 572 IPR003959 GO:0005524|GO:0016887
Sebi8g00095 660 FunFam 14-3-3 protein epsilon 1 245 - -
Sebi8g00095 660 ProSitePatterns 14-3-3 proteins signature 2. 214 233 IPR023409 -
Sebi8g00095 660 Coils Coil 10 30 - -
Sebi8g00095 660 CDD RecA-like_BCS1 416 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi8g00095 Sebi-Chr8 3192874 3201206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi8g00095 4 240 14-3-3 family AT2G42590 81.013 1.79e-140 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi8g00095 K08900 - gmx:100778503 630.172