Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi8g00088 | ATGACTACTAAATTTTCCCCTCCAACAATTCCTCCTAATGCTACACTCCAATTCGATGTTGAGCTACTGTCTTGGACTAGTGTGAAGGACATATGTAAAGATGGCGGCATATTTAAGAAGATACTTACTGTGGGGGAGAAGTGGGAGAACCCCAAGGATCCTGATGAAGTATTGGGTATATGTATACTTCTCATTATGAGGTTCGAAGATGGTAAGCTTGTTGCAAAGTCTGATGGGGTGGAGTTCACCGTCAACGAGGGTCATTATTGTCCTGCATTGTCAAAGGCTGTTAAAACCATGAAGAAAGGAGAGAAAGTGATTTTGACAGTAAAGCAACAATATAAGTTGTATGGATTTGGTGAGAAGGGACAGCCAGCATATGGTGATGAAGGTGCAATTCCTCCAAATGCAACATTGCAGATTACTCTTGAGTTAGTTTCTTGGAAGACTGTATCAGAAGTAACTGGTGACAAGAAGGTCATAAAGAAGATCCTCACTGAAGGGGAAGGATATGAGCGTCCAAATGAAGGGGCCATTGTGAAATTGAAACTAATTGGTAAGCTGCAAGATGGCACTGTCTTTTCAAAAAAGGGCCATGGTGAAGATGAGCAGCTGTTTGAATTCAAAACAGATGAGGAACAAGTCATTGACGGACTTGATAGAGCTGTAATGACTATAAAGAAGGTGATCCCTCCTAACTCAACTGTGTATTATGAAGTTGAGCTAGTGTCATTTGAGAAGGAGAAGGAATCCTGGGATCTGAACACTCAAGAGAAACTTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGGAATGTGTTGTTTAAAGCTGGTAAATATGCTAGAGCTTCCAAAAGGTATGAGAAGGCTGTGAAGTACATCGAGTATGATTCCTCCTTCAACTATAAAGAAGCAGAGAAATTGTGTACCAAGGTGTTGGACCTTGAGACCACAAACGTTAAAGCCCTCTATAGAAGGGCCCAGGCATATATGCAGTTGGCTGATTTGGATTTGGCTGAATTGGACATCAAGAAAGCTCTTGAGATTGACCCTGACAACAGGGATGTCAAGCTGGAATACAAGACTTTGAAGGAAAAAGTAAAGGAGTATAACAAAAAGGAGGCGAAATTTTATGGAAATATGTTCAAGTTTACAAAGACCGGATCCTGA | 1167 | 0.4105 | MTTKFSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKKILTVGEKWENPKDPDEVLGICILLIMRFEDGKLVAKSDGVEFTVNEGHYCPALSKAVKTMKKGEKVILTVKQQYKLYGFGEKGQPAYGDEGAIPPNATLQITLELVSWKTVSEVTGDKKVIKKILTEGEGYERPNEGAIVKLKLIGKLQDGTVFSKKGHGEDEQLFEFKTDEEQVIDGLDRAVMTIKKVIPPNSTVYYEVELVSFEKEKESWDLNTQEKLEAAGKKKEEGNVLFKAGKYARASKRYEKAVKYIEYDSSFNYKEAEKLCTKVLDLETTNVKALYRRAQAYMQLADLDLAELDIKKALEIDPDNRDVKLEYKTLKEKVKEYNKKEAKFYGNMFKFTKTGS | 388 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi8g00088 | 388 | Pfam | Tetratricopeptide repeat | 319 | 352 | IPR001440 | GO:0005515 | |
Sebi8g00088 | 388 | SUPERFAMILY | FKBP-like | 152 | 263 | - | - | |
Sebi8g00088 | 388 | Gene3D | Tetratricopeptide repeat domain | 245 | 298 | IPR011990 | GO:0005515 | |
Sebi8g00088 | 388 | FunFam | Peptidylprolyl isomerase | 29 | 149 | - | - | |
Sebi8g00088 | 388 | SUPERFAMILY | TPR-like | 252 | 381 | IPR011990 | GO:0005515 | |
Sebi8g00088 | 388 | Gene3D | Tetratricopeptide repeat domain | 299 | 382 | IPR011990 | GO:0005515 | |
Sebi8g00088 | 388 | ProSiteProfiles | TPR repeat profile. | 319 | 352 | IPR019734 | GO:0005515 | |
Sebi8g00088 | 388 | Gene3D | - | 150 | 229 | IPR046357 | GO:0003755 | |
Sebi8g00088 | 388 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 300 | 382 | - | - | |
Sebi8g00088 | 388 | SUPERFAMILY | FKBP-like | 5 | 148 | - | - | |
Sebi8g00088 | 388 | Gene3D | - | 26 | 149 | IPR046357 | GO:0003755 | |
Sebi8g00088 | 388 | SMART | tpr_5 | 319 | 352 | IPR019734 | GO:0005515 | |
Sebi8g00088 | 388 | SMART | tpr_5 | 263 | 296 | IPR019734 | GO:0005515 | |
Sebi8g00088 | 388 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 67 | 149 | IPR001179 | GO:0003755 | |
Sebi8g00088 | 388 | Coils | Coil | 352 | 372 | - | - | |
Sebi8g00088 | 388 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 177 | 246 | IPR001179 | GO:0003755 | |
Sebi8g00088 | 388 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 67 | 146 | IPR001179 | GO:0003755 | |
Sebi8g00088 | 388 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 171 | 227 | IPR001179 | GO:0003755 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi8g00088 | Sebi-Chr8 | 2852197 | 2854618 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi8g00088 | 6 | 381 | Calmodulin-binding Proteins | AT3G25230 | 68.852 | 0.0 | 574 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi8g00088 | K09571 | - | gmx:100812632 | 620.157 |