Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi8g00084 ATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCTTGGAGAAAGAAGAGAAAGTATGAGCTTGGTCGCCAGCCAGCAAATACCAAGTTATCAAGCAACAAGACAGTTAGGAGGATTCGTGTCAGAGGTGGCAATGTGAAATGGAGGGCATTGAGGTTGGATACTGGAAATTACTCATGGGGTAGTGAAGCAGTAACTCGCAAGACTCGTATTCTAGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAAACCCTGGTCAAGAGTGCTATTGTCCAGGTTGATGCCGCTCCATTCAAACAGTGGTACTTGCATCACTATGGTGTTGATATTGGTAGAAAAAAGAAAGCAACATCCAAGAAGGACTCTACAGAGGAGGGTGGTGAAGCTGCTGCTGAAGAAACTAAGAAAAGTAATCATGTTCAGAGAAAACTTGAGAAGCGCCAGAAAGATCGTAAGCTTGATCCTCACATTGAAGAGCAGTTTGGTGGTGGTCGATTGCTGGCCTGTATTTCTTCTCGCCCTGGTCAATGTGGCCGGGCTGATGGGTACATTCTGGAAGGTAAGGAACTGGAATTTTACATGAAGAAATTACAGAAGAAGAAGGGAAAGGGTGCTGCTTAA 636 0.4544 MHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLHHYGVDIGRKKKATSKKDSTEEGGEAAAEETKKSNHVQRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi8g00084 211 FunFam 40S ribosomal protein S8 25 154 - -
Sebi8g00084 211 CDD Ribosomal_S8e_like 2 190 - -
Sebi8g00084 211 Pfam Ribosomal protein S8e 2 190 IPR022309 -
Sebi8g00084 211 PANTHER 40S RIBOSOMAL PROTEIN S8 1 208 IPR001047 GO:0003735|GO:0005840|GO:0006412
Sebi8g00084 211 NCBIfam ribosomal protein eS8 2 192 IPR001047 GO:0003735|GO:0005840|GO:0006412
Sebi8g00084 211 Gene3D - 25 155 - -
Sebi8g00084 211 Gene3D - 156 208 - -
Sebi8g00084 211 MobiDBLite consensus disorder prediction 118 161 - -
Sebi8g00084 211 ProSitePatterns Ribosomal protein S8e signature. 4 23 IPR018283 GO:0003735|GO:0005840|GO:0006412
Sebi8g00084 211 FunFam 40S ribosomal protein S8 155 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi8g00084 Sebi-Chr8 2782320 2803684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi8g00084 1 199 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.500 5.17e-121 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi8g00084 K02995 - pcin:129288318 371.318