Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi8g00078 ATGTCCACTTCTCTCCCCTTTACCCAATTCTACAACTCATGGTTCGACCAGTTACGCCACCTGGTCCACCACCTATCCACGGTGCCCCTCACACCGGACCAAAACGAGGACCACCTTCTCCCCCTCGTCAACAAGGTCATGTCCCACCATGAAGACTACTTCCATGCCAAGTCACTCGCCACTGAGAAGGACCCACTCCACGTGTTGGCCTCTCCCTGGGTCACCACCATGGAACGTTCCCTTTATTGGATCACAGGGTGGCGCCCCACCACCGCCTTCCACCTCATCTACACCGAATCATCTCATCTCTTTGAGTCTCACATCATCGACATCCTTCGTGGCCTCCACACCGGTGACCTCGGTGATCTCTCCCCTGTTCAGTTCCAGCGAGTCAGCGAGTTGCAATGTGAAACCGTGAAGGAAGAGAATGCAATCACAGATGAGTTATCAGAGTGGCAGGACAGTGTAAGTGAGATGATGGGACCAAGACCGGATCTTAACGAGAAGATCGGACGGCTGGTGATCATTATAAAGAAAGCGGATGATCTACGGCTGAAAACTCTGCGGAGCGTGGTGGGGTTGCTGTCGCCGCAGCAGGCTATCGAGTTCTTGATTGCTGCAGCAGAATTGCTTGTTGGGATCCGTGGTTGGGGATTGAATCATGACCGTGCACATCGTCGGTAA 684 0.5351 MSTSLPFTQFYNSWFDQLRHLVHHLSTVPLTPDQNEDHLLPLVNKVMSHHEDYFHAKSLATEKDPLHVLASPWVTTMERSLYWITGWRPTTAFHLIYTESSHLFESHIIDILRGLHTGDLGDLSPVQFQRVSELQCETVKEENAITDELSEWQDSVSEMMGPRPDLNEKIGRLVIIIKKADDLRLKTLRSVVGLLSPQQAIEFLIAAAELLVGIRGWGLNHDRAHRR 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi8g00078 227 ProSiteProfiles DOG1 domain profile. 4 224 IPR025422 GO:0006351|GO:0043565
Sebi8g00078 227 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 6 226 - -
Sebi8g00078 227 Pfam Seed dormancy control 21 98 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi8g00078 Sebi-Chr8 2618488 2619596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi8g00078 4 206 bZIP Transcription Factor Family AT5G06950 23.636 5.10e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi8g00078 - - gmx:778192 312.768