Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi8g00041 ATGGAGAATCGCCATCCTTCATATGACAGAAAGGCTTTGGAACAAGAGCTAGCCAGAGGACATGACATGGCAAACCAATTACTTGAAGTACTTGTTCATAAATATTCAAATACTCATCATGGAGATGTTGAAGGGTTAATGTTACCGTTTGCCAAAGATCTTGTGCATAAGGTACTAACATCGTTCACAAACACCCTTTTGCTCTTGAACAGCGATAGTGATGATGTCTCCGGTGAGGAAGTTTTGCCTAATTTCTCTTCCTCGGCAAACTTCCCAAAGCCTGAGGATACAGATGAGGCTTGCAAGAGTAGTTTCATGAACGCTAAAAATCGAAGAGGCTGCTACAAAAGAAAATTAAATGCTCTAACTTGGGAGAGGGATAGCTCAACTCTGATTGAAGATGGGTATGCATGGAGAAAGTATGGGCAAAAAAGGATAATGAATACGAAATACCTCAGGAGCTACTATAGATGCACTCACAAAGATGATCAGAATTGTCCAGCTATCAAACAAGTGCAGAGAATTCAAGAGGACCCCCCATTGTACCGGACAACCTATTATGGCCATCACAATTGCAAAAGCTTTTTAAATGCAGAGATGATCTTAGAAACTAATACTTCTTTTGACTCTTCTGTATTCCTTACCTTCAATAACAGCCTCCCAAGCAAAGAATACTCGTTTTCATCATCACTTTTTCCATCCACGAAACATGAGCCAATGGAAGTGATTCCCGATTATCATATTTCTCACAACAAACTACACTCAACAAATTGCGCCCTGTTATGTGACAATGAACTTGATTTCGATTATTTGAGGCGTGTGCTATCATCAACCGAATGTGTTCAATTTGGTAACGTTTATGGGCATTGTTTGAATTTTGATGGCTAG 888 0.3975 MENRHPSYDRKALEQELARGHDMANQLLEVLVHKYSNTHHGDVEGLMLPFAKDLVHKVLTSFTNTLLLLNSDSDDVSGEEVLPNFSSSANFPKPEDTDEACKSSFMNAKNRRGCYKRKLNALTWERDSSTLIEDGYAWRKYGQKRIMNTKYLRSYYRCTHKDDQNCPAIKQVQRIQEDPPLYRTTYYGHHNCKSFLNAEMILETNTSFDSSVFLTFNNSLPSKEYSFSSSLFPSTKHEPMEVIPDYHISHNKLHSTNCALLCDNELDFDYLRRVLSSTECVQFGNVYGHCLNFDG 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi8g00041 295 Gene3D WRKY domain 119 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi8g00041 295 SUPERFAMILY WRKY DNA-binding domain 128 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi8g00041 295 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi8g00041 295 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi8g00041 295 ProSiteProfiles WRKY domain profile. 127 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi8g00041 295 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 217 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi8g00041 Sebi-Chr8 1754674 1756585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi8g00041 16 199 WRKY Transcription Factor Family AT3G56400 39.683 4.48e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi8g00041 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi8g00041 - - gmx:102663141 314.694