Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi8g00007 ATGAACATGACTTCCCCTCGATTGTTCCACCTTTGCTGGCTTCTTTGCTTTTATTTGGTCTCTTCTTTTGCTAGTGGAGCTACTCTGTTAAAAGAAGAAGTGCAAATTTTGAAAGACATAGGTAAGACACTTGGGAAGAAGGATTGGGACTTCAGTGTAGATCCGTGCAGTGGACAGAGTAACTGGACATCATCTGTTCAAGTGAAAGGGAGCGAAAATGCTGTCAGCTGCAATTGCTCTTTAGCTAATGCCACAGTCTGCCATGTTGTTAGCATTGTTCTCAAGTCTCAAAATCTTACGGGCACACTCCCAGGTGAACTGGTGAAGTTGCCTTACCTCCAAGACATTGACCTCACGCGCAACTACCTTAATGGTACAATCCCTCCACAATGGGGCTCCATGAACCTTGTCAACATTTCCCTTCATGGAAACCGAATAACGGGTCCAATCCCAAAAGAACTAGGAAACATCACCACCCTGAAAAGTTTGGTCCTGGAGTTCAATCAATTATCTGGAAAGCTTCCTTCAGAGCTTGGAAACCTCCCCCGGCTTGAAAGACTGCTTCTCACCTCCAACTATTTAACTGGAAATTTACCTGCAACATTTGCTAAGCTCACTATGCTAAAGCACCTGGTGATGCAAGGGAGTGGTTTGAGTGGCCCAATTCCTTCTGGAATTTCATTTCTTCAAAACCTCACTGACTTGAGAATTAGTGACCTGAAAGGAGCAGATTCTTATTTTCCGCAACTTAATAACTTGACAAATTTGCAAACACTAGTACTGAGGAGCTGCAATCTTATAGGAACTGTTCCTGAATATCTTGGAAATATGACTAATTTAAGATCATTATATTTAACAGGAAACAATTTTACTGGACCACTTCCCAACTGGATAGCTAGACCAGACTACACAGATCTCTCATATAACAACTTGAGCATCAATAACCCAGATCAGTTGACATGTCAACAGGGAACTGTGAACTTATTTGCATCATCTTTGAGGGGAAATAACTCGGGAATGGTTCCATGTTTGGGAAACACTAATTGTCCTAAAACTTGGTACTCTCTCCATATAAATTGTGGTGGAAAGCTCATAACTTCTAATGAAAGAATGACATATGATGATGATTCAAATGAAGCCGGACCTGCAACATCTTACCGGACTGGATCAAATTGGGCAGTTAGCAACACTGGTCACTTCTTTGATAGTGGCCGCATAGACTACTACACCTGGTCTAACTCAACTAAGCTTGCTATGGACAATGGTGAACTGTATATGGATGCACGTGTTTCTCCCCTTTCTCTCACATATTATGGATTTTGCCTGGGAAATGGAAACTACACAGTAAATCTCCATTTTGCTGAGATAATGTTCACTGATGATCAAACATATTCTAGCCTCGGAAGGCGTGTATTTGACATTTATATTCAGAGAAAGTTAGTGCTGAAGGATTTCAATATTGCAAAAGAAGCAGGAGGAGTTGGTAAGGCAATCATAAAAAAGTTCACTGCTATTGTGACTAATAATACCTTGGAGATCCGCTTTCATTGGGCCGGGAAAGGGACAACTGGTATCCCGTTTGGATCAGTACATGGTCCTCTTATATCAGCTATATCTGTTGATCCTGACTTTACACCCCCAGTGGAAAATGGAAGAAGCATACCTGTGCGGTCTATTGTTGCAATTGTAGTTGCTGGAGCACTTGTTATCATCATAGTATTTGGTATAGCTTGGTGGAGAGGATGTTTACGACAGAAAGGTTCATTAGAAAGAGGGCTAAGGGGTTTAGATCTGCAAACTGGCTTATTTACCTTACGGCAAATCAGAGCAGCAACTAACAACTTCGATATTGCCTTTAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTGTTCTTTCAGATGGCACCGTCATAGCAGTTAAGCAGCTTTCTTCTAAATCAAATCAAGGGAATCGTGAATTTATAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCGTGTCTAGTTAAGCTCTATGGCTGTTGTATGGAGGGAGATCAGTTGTTGTTGATATATGAATACATGGAAAACAATAGCCTTGCTCGTGCTTTGTTTGCCCGGGAAAAAGGTCAATTGATGTTGGATTGGTCAACAAGGCGGAGTATTTGTGTTGGTATTGCTAGAGGTTTGTCTTACCTCCATGGAGAATCAAAGCTAAAGATAGTTCACAGGGACATCAAGGCCACTAATGTGTTACTTGATAAAGATCTCAATCCAAAGATATCTGATTTTGGCTTGGCCAAGCTTAAAGAAGAGGGCTATACCCACATAACCACCAGAGTAGCTGGCACTTATGGATATATGGCTCCTGAGTATGCAATGCATGGTTATTTGACTGAGAAAGTAGATGTTTATAGTTTTGGAGTCGTTGCCTTGGAAGTTGTTAGTGGGAAGAGCAACACCATGAACTGGCCAAAGGAAGAATGCTTCTCTCTTGTTGATTGGGTGCATATCTTGAAAGAAGAAGGTAATATAATGGAACTAGTTGATGAGAGGTTGGGTGATAACTTCAAAAAAGAGGAAGTAATGGTCATGATCAATGTAGCCCTTCTATGCACACAAGTTTCTCCAATGCAAAGGCCCACCATGTCCTCAGTGGTAAGCATGCTTGAAGGCAAAACTGTTGTTCAAGAGGTGGTTCCAGACACAAACCAAGTGTTTGAAGGCAAGAAATTGGAGGTTATCCAACAGTATTGCCGGCAGAGAGAAAAAAATGAGACCCCTGAGTCTCAAGAAGAGAGCATCTCAATAGATGAAACTGCAGCATTCATGTCTGATACAGATCTATATTCTGTCAACAAGGATTCTTCTTATTGGGAGAAAAGTGATTAG 2880 0.4139 MNMTSPRLFHLCWLLCFYLVSSFASGATLLKEEVQILKDIGKTLGKKDWDFSVDPCSGQSNWTSSVQVKGSENAVSCNCSLANATVCHVVSIVLKSQNLTGTLPGELVKLPYLQDIDLTRNYLNGTIPPQWGSMNLVNISLHGNRITGPIPKELGNITTLKSLVLEFNQLSGKLPSELGNLPRLERLLLTSNYLTGNLPATFAKLTMLKHLVMQGSGLSGPIPSGISFLQNLTDLRISDLKGADSYFPQLNNLTNLQTLVLRSCNLIGTVPEYLGNMTNLRSLYLTGNNFTGPLPNWIARPDYTDLSYNNLSINNPDQLTCQQGTVNLFASSLRGNNSGMVPCLGNTNCPKTWYSLHINCGGKLITSNERMTYDDDSNEAGPATSYRTGSNWAVSNTGHFFDSGRIDYYTWSNSTKLAMDNGELYMDARVSPLSLTYYGFCLGNGNYTVNLHFAEIMFTDDQTYSSLGRRVFDIYIQRKLVLKDFNIAKEAGGVGKAIIKKFTAIVTNNTLEIRFHWAGKGTTGIPFGSVHGPLISAISVDPDFTPPVENGRSIPVRSIVAIVVAGALVIIIVFGIAWWRGCLRQKGSLERGLRGLDLQTGLFTLRQIRAATNNFDIAFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSNQGNREFINEIGMISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLARALFAREKGQLMLDWSTRRSICVGIARGLSYLHGESKLKIVHRDIKATNVLLDKDLNPKISDFGLAKLKEEGYTHITTRVAGTYGYMAPEYAMHGYLTEKVDVYSFGVVALEVVSGKSNTMNWPKEECFSLVDWVHILKEEGNIMELVDERLGDNFKKEEVMVMINVALLCTQVSPMQRPTMSSVVSMLEGKTVVQEVVPDTNQVFEGKKLEVIQQYCRQREKNETPESQEESISIDETAAFMSDTDLYSVNKDSSYWEKSD 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi8g00007 959 Gene3D Ribonuclease Inhibitor 35 198 IPR032675 -
Sebi8g00007 959 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 17 904 - -
Sebi8g00007 959 SMART serkin_6 615 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi8g00007 959 CDD STKc_IRAK 621 888 - -
Sebi8g00007 959 Gene3D Transferase(Phosphotransferase) domain 1 691 902 - -
Sebi8g00007 959 Pfam Leucine Rich Repeat 279 298 IPR001611 GO:0005515
Sebi8g00007 959 Gene3D Phosphorylase Kinase; domain 1 588 690 - -
Sebi8g00007 959 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 584 690 - -
Sebi8g00007 959 ProSiteProfiles Protein kinase domain profile. 615 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi8g00007 959 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 33 192 - -
Sebi8g00007 959 SUPERFAMILY Protein kinase-like (PK-like) 599 894 IPR011009 -
Sebi8g00007 959 Pfam Protein kinase domain 620 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi8g00007 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Sebi8g00007 959 FunFam Putative LRR receptor-like serine/threonine-protein kinase 691 898 - -
Sebi8g00007 959 SUPERFAMILY L domain-like 76 317 - -
Sebi8g00007 959 Gene3D Ribonuclease Inhibitor 199 356 IPR032675 -
Sebi8g00007 959 Gene3D - 357 542 - -
Sebi8g00007 959 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 353 543 - -
Sebi8g00007 959 Pfam Malectin domain 355 538 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi8g00007 Sebi-Chr8 155225 166265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi8g00007 20 909 Receptor kinase-like Gene Family AT1G53420 51.592 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sebi8g00007 Pkinase 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi8g00007 - - gmx:100786496 1539.63