Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi8g00006 ATGGTTGGTGAGGCTGCAGTTGTGGTCAGGGACGATGAGCTCATGGTGGTGGTGGTGGAGGAGATTGTTGCATTGGAAGGTGAAACTGCTACTGGAATTAACATTTTTAGTGCCTTCTACCATAGACTCAAAGAGTTGATTTCTTTTTCGGAGGGTGTTTTGGAGGCTATAGCTCTTTTGCAGAAACTCTTTCAATCAAACTCAGGTGTGTTCTTAATGCTTCTAGTACTTGATGATTCTGATGATGAGACCATACAGTGGTTAATTAAGGTTGAGGTCACGAAGTGGAGCCAAAAGGGAATCAACATAATCTACAGGCATCGCTTAGTAAGAACTGGATATAAAGCTGGGAATCTAAAGTCTGCAATGAGTTGTGACTATGTGAAAGACTATGAATTTGTTGTAATTTTTGATGCATACTTCCAACTCCTTATTTTCTTAAGCAAACTGTGCCATATTTAA 462 0.3983 MVGEAAVVVRDDELMVVVVEEIVALEGETATGINIFSAFYHRLKELISFSEGVLEAIALLQKLFQSNSGVFLMLLVLDDSDDETIQWLIKVEVTKWSQKGINIIYRHRLVRTGYKAGNLKSAMSCDYVKDYEFVVIFDAYFQLLIFLSKLCHI 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi8g00006 153 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 53 145 IPR029044 -
Sebi8g00006 153 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 72 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi8g00006 Sebi-Chr8 129182 130055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi8g00006 72 142 REM Transcription Factor Family AT2G24630 83.099 7.32e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi8g00006 - - gmx:100790165 135.191