Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi89g00080 ATGGCTAAAGATATTGAGGTTCAAGAGCAAGGAGAATACTCAGCTAAAGACTACCAAGACCCACCTCCTGCACCCTTGTTCGATCCAGAGGAGCTCACACAGTGGTCCTTCTACAGAGCCATCATCGCTGAGTTCATAGCCACCCTTCTCTTCCTTTATGTCACCGTTTTAACCATCATTGGCTACAAACACCAAACTGATAAGACCATTGGTGGCACTGATTGTGATGGTGTTGGCATTTTGGGTATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACCGCCGGTATTTCTGGAGGACACATAAACCCTGCTGTGACATTTGGGTTGTTCTTGGGACGCAAGGTGTCTTTGATAAGGGCGTTTTTGTACATGGTAGCACAGTGTGCTGGTGCTATCTGTGGAACTGGACTAGCCAAGGGCTTCCAAAAAGCATACTACAACAGGTATGGAGGTGGTGCTAACTCTGTGGCAGATGGTTACAGCAAAGGTACCGCTTTGGGTGCTGAGATTATTGTTACTGGTACTGGCATTAACCCAGCAAGAAGTTTCGGAGCAGCTGTCATTTACAATGAAGACAAAATCTGGGATGACCAGTGGATTTTCTGGGTTGGACCATTTCTTGGAGCTCTAGCAGCTGCTATCTACCACCAATACATTCTTAGAGCAGCAGCAATCAAGGCTCTTGGATCCTTCAGGAGCAACAATTAA 723 0.4661 MAKDIEVQEQGEYSAKDYQDPPPAPLFDPEELTQWSFYRAIIAEFIATLLFLYVTVLTIIGYKHQTDKTIGGTDCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRAFLYMVAQCAGAICGTGLAKGFQKAYYNRYGGGANSVADGYSKGTALGAEIIVTGTGINPARSFGAAVIYNEDKIWDDQWIFWVGPFLGALAAAIYHQYILRAAAIKALGSFRSNN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi89g00080 240 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 176 229 IPR034294 -
Sebi89g00080 240 Gene3D Glycerol uptake facilitator protein. 178 240 IPR023271 -
Sebi89g00080 240 Gene3D Glycerol uptake facilitator protein. 24 177 IPR023271 -
Sebi89g00080 240 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi89g00080 240 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi89g00080 240 PRINTS Major intrinsic protein family signature 204 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi89g00080 240 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi89g00080 240 SUPERFAMILY Aquaporin-like 30 226 IPR023271 -
Sebi89g00080 240 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Sebi89g00080 240 MobiDBLite consensus disorder prediction 1 23 - -
Sebi89g00080 240 Pfam Major intrinsic protein 31 178 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi89g00080 Sebi-Chr89 1901681 1902937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi89g00080 1 238 Major Intrinsic Protein MIP AT5G60660 65.018 2.91e-130 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi89g00080 K09872 - gmx:100811119 441.039