Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi897g00007 ATGGCTTCCCTTCTTCCACATGCTCCTAGTAATCATCAAAATAAACCAAACACAACATCAATACTCGAGCAAAATGTCCTAGATATTGAAGCTCAAGCCACTAGATTGGAGATAGAAGCATTGAAAGCTCCAAAAGGAATCAATGGAAGAGATCATGCTTCAGAGATGGGTATATGCTTGACATGGAAGGATCTATGGGTGACTGCTTCAATGGGAAAACATGGAAGCAAATCAATTCTTGAGGGTCTAACTGGTTATGCCAAGCCAGGGCAACTCTTAGCCATAATGGGTCCTTCTGGTTGTGGAAAATCTACTCTTCTTGATACTTTAGCAGGGAGACTAGGCTCAAACACAAGGCAAACAGGGGAAATTCTGATCAATGGTCACAAGCAAGCACTAGCTTATGGAACCTCGGCATATGTCACACAAGATGATACCTTACTAACAACCTTAACAGTTAAGGAAGCAGTGCATTACTCAGCTCAACTCCAATTGCCTGATTCAATGTCCAAAGCAGAGAAGAAAGAGAGAGCTGATTTTACAATCAGAGAAATGGGTCTCCAAGATGCAATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATTAGTGGTGGTCAAAAGAGGAGAGTGAGCATTTGCATTGAGATCCTAACACGCCCTACACTTCTCTTTCTTGATGAACCAACTAGTGGATTGGATAGTGCTGCTTCCTACTATGTCATGAAAAGAATTGCTACCTTGGATAAAAAAGATGGCATTCAGAGAACTATCATTGCCTCAATCCATCAACCTAGCACTGAAGTTTTTCAACTTTTCCACAACCTCTGTCTTCTATCTTCAGGTAGAACAGTTTACTTTGGACCTGCTTCTGCTGCATGTGAGTTTTTTGCATCAAATGGTTTTCCTTGTCCTGCCCTCCAGAATCCATCTGATCATTTACTTAAAACTATAAATAAGGATTTTGATCAGGATATTGAGGAGGGTTTGGAAGGGAGTGGAACAATACCCACAGAAGAAGCAATTCGCATCCTTGTGAGTTCATATAAATCATCTGAAATGAACCAACAAGTTCAAAATGAAGTTGCAATACTATCTAAAAAGGACACTGATTCAACGGACAAGAAGAGAAGGCATGCTGGCTTCCTTAATCAGTGTTTAGTTCTTACCAAAAGATCTTCCGTGAACATGTTTCGTGATTTAGGCTATTACTGGTTACGCCTTGCCATATATATAGCATTAGCTATAAGTTTAGCTACTGTCTTCTATGATTTGGATAAAAGTAATGGCTCAATTCAGGATAGAGGTTCATTTCTTATGTTTGTATCCTCATTCATAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTAGAGGACATGAAGGTATTTGGACGTGAAAGACTAAATGGGCATTATGGTGTTACTGCATATGTCATTGGGAACACCTTTTCGTCTATCCCATACTTGTTTATGGTTTCACTGATTCCTGGAGCTATAGCTTATTACCCTCCTGGTCTTCAAAAAGGATTTGAGCACTTTGTGTATTTTATTTGTGTTCTATTTGCTTGTCTAATGTTAGTAGAGAGCCTTATGATGATTGTGGCTAGCATTGTCCCCAACTTTCTAATGGGTATCATAACTGGTGCTGGAATTCAAGGAATCATGATGTTATGTGGTGGGTTCTTTAGATTGCCAAATGATCTTCCTAAGCCAGTTTGGAAATACCCAATGTTCTATGTTGCCTTCCATAGGTATGCTTATCAAGGAATGTTCAAAAATGAGTTTGAAGGGCTAAAGTTTGAAGGAAGTGAAGTTGTTGGTGGCTCAACTAATTACATTAGTGGTGAAGAGATTCTAAGGAATAGATGGCAAGTAGACATGAGTTACTCAAAGTGGGTTGATTTTGGAATCTTGTTGGCAATGAATGTTCTATATCGTGTTCTATTTTTGGTTATCATCAAAACTACTGAGAAGCTAAAGCCACTTGTTGTATCATTCATGTCGGGGACTCCCAAGCAAACAATACAGATCATGGAGAATCCTAATGCCACTCCTTTACATGGATAA 2070 0.3937 MASLLPHAPSNHQNKPNTTSILEQNVLDIEAQATRLEIEALKAPKGINGRDHASEMGICLTWKDLWVTASMGKHGSKSILEGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILINGHKQALAYGTSAYVTQDDTLLTTLTVKEAVHYSAQLQLPDSMSKAEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPTLLFLDEPTSGLDSAASYYVMKRIATLDKKDGIQRTIIASIHQPSTEVFQLFHNLCLLSSGRTVYFGPASAACEFFASNGFPCPALQNPSDHLLKTINKDFDQDIEEGLEGSGTIPTEEAIRILVSSYKSSEMNQQVQNEVAILSKKDTDSTDKKRRHAGFLNQCLVLTKRSSVNMFRDLGYYWLRLAIYIALAISLATVFYDLDKSNGSIQDRGSFLMFVSSFITFMTIGGFPSFVEDMKVFGRERLNGHYGVTAYVIGNTFSSIPYLFMVSLIPGAIAYYPPGLQKGFEHFVYFICVLFACLMLVESLMMIVASIVPNFLMGIITGAGIQGIMMLCGGFFRLPNDLPKPVWKYPMFYVAFHRYAYQGMFKNEFEGLKFEGSEVVGGSTNYISGEEILRNRWQVDMSYSKWVDFGILLAMNVLYRVLFLVIIKTTEKLKPLVVSFMSGTPKQTIQIMENPNATPLHG 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi897g00007 689 SMART AAA_5 89 278 IPR003593 GO:0016887
Sebi897g00007 689 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524|GO:0016887
Sebi897g00007 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 306 IPR003439 GO:0005524
Sebi897g00007 689 Pfam ABC-2 type transporter 263 318 IPR043926 GO:0140359
Sebi897g00007 689 Gene3D - 60 298 IPR027417 -
Sebi897g00007 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 297 IPR027417 -
Sebi897g00007 689 Pfam ABC transporter 82 231 IPR003439 GO:0005524
Sebi897g00007 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 53 669 - -
Sebi897g00007 689 FunFam ABC transporter G family member 11 58 348 - -
Sebi897g00007 689 Pfam ABC-2 type transporter 385 596 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi897g00007 Sebi-Chr897 223948 227998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi897g00007 79 291 Calmodulin-binding Proteins AT2G36910 29.224 3.28e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi897g00007 K05681 - gmx:100813462 1058.13