Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi897g00004 ATGACTTCCTTTCATCCATCTCTTCCAACGGCTCCTAGTAGTGATAATGAAACTAAACACAGATCAAATTCAGTTGCAACTGTCCTAGACATTAAGGTCCCAACACTGGAAATGAAAACTTGTAGTTGTAGAGCTCCAAGAGCTGGGGTTCAAGTTGAGACTCAAACAGAAGAGGGTGTCTGCTTGACATGGAAGGATGTATGGGTGATGACTACTTCCAATAGAAAGAATGGAAGTAAATCAATTCTTCAAGGTCTAACTGGTTATGCCAAGCCAGGGCAGCTCTTAGCCATAATGGGCCCTTCTGGCTGTGGCAAGTCTACACTACTTGATACTTTAGCAGGGAGACTAGGCTCAAACACAAGGCAAATAGGGGAAATTCTTATCAATGGTCACAAGCAAGCACTAGCTTATGGAACTTCGGCATATGTCACTCAAGATGATACCTTACTAACAACCTTAACAGTTAAGGAAGCAGTGCATTACTCAGCTCAACTTCAGTTACCTGATTCAATGTCCAAAGCAGAGAAGAAAGAGAGAGCTGACTTTACAATAAGAGAAATGGGTCTCCAAGATGCCATTAACACAAGAATTGGAGGGTGGGGTGTTAAAGGAATTAGTGGTGGTCAAAAGAGAAGAGTGAGCATTTGCATTGAGATCCTAACACGCCCTAAACTTCTCTTTCTTGATGAACCAACTAGTGGATTGGATAGTGCAGCTTCCTACTATGTCATGAAAAGAATTGCTACCTTCGATAAAAAAGATGGCATTCAAAGAACTATTATTACATCAATCCATCAACCTAGTACTGAAGTTTTTCAACTTTTCCATAACCTCTGTCTTTTATCTTCAGGTAGAACAGTTTACTTTGGACCTGCTTCTGCTGCATGTGAGTTTTTTACTTCAAATGGTTTTCCTTGTCCTGCCCTCCAAAATCCATCTGACCATTTACTTAAAACTATAAACAAGGATTTTGATCAGGATTTTGAGGTGGGTTTAGTAGGGACTGGAACAATACCCACAGAAGAAGCAATCCGTATTCTTGTGCACTCATATAAATCATCTGAATGGAATCAAGAAGTTCAAAATGAAGTAGAATTACAATCTAAAAAGGATACCAGTTCAATTGACAAGAAGAGAGGGCATGCAGGCTTCCTTAATCAATGCATAGTTCTTTACAAAAGATCATCTGTCAACATGTTTCGTGATTTAGGATATTATTGGTTACGCCTTGTTATATATGTTGCATTGGCTATAAGTTTAGGCACTATTTTCTATGACTTGGGCATAAGTAAGGGCTCAATTCAGGATCGAGGTTCACTTCTTTCATTTGTGACTGGATTCTTAACATTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAAGACATGAAGGTATTTCAAAGAGAGAGAGAAAATGGACATTATGGGGTTGTTGCATTTGTAATTGGGAACACCTTTTCATCTCTCCCATACTTGTTATTGGTTTCAGTGATTCCTGGAGCCATAACTTATTACCTTCCTGGTCTTCAGAAAGGGTGTGAACACTTTCTGTACTTCCTCTGTGTTTTATTTTCTAGTCTAATGTTAGTGGAGAGTCTTATGATGATAATTGCCAGCATTGTCCCCAATTATCTAATGGGAATCATAACTGGTGCTGGAATTCAAGGAATCATGCTTTTACTTGGTGGGTTCTTTAAATTGCCAAATGATCTTCCTAAGGTAGTTTGGAGATACCCTTTACACTATATTGCCTTCCATAGGTATGCCCTCCAAGGATTGTTCAAGAATGAATATGAAGGACTAAGATTTGTTATAGATAAAGGTGGAGAAGGCTCACACAATTACATTAGTGGTGAAGAGGTTTTAAGAAATACTTGGCAAACTGACATGAGTTGCTCAAAATGGGTTGATCTTGTGATTTTGCTAGGGATGATTGTTTTGTATCGGGTTTTGTTCTTTATTATCATCAAGACTATTGAGAAGGTGAAGCCCATTGTTGGATCATTATCATGCATGTCAATGTCTCCCAAGCAAACAATAGAGGTGGTGGAGAACCCCAATGCCACTCCTATACATGAAGAGGTATGA 2091 0.3912 MTSFHPSLPTAPSSDNETKHRSNSVATVLDIKVPTLEMKTCSCRAPRAGVQVETQTEEGVCLTWKDVWVMTTSNRKNGSKSILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQIGEILINGHKQALAYGTSAYVTQDDTLLTTLTVKEAVHYSAQLQLPDSMSKAEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIATFDKKDGIQRTIITSIHQPSTEVFQLFHNLCLLSSGRTVYFGPASAACEFFTSNGFPCPALQNPSDHLLKTINKDFDQDFEVGLVGTGTIPTEEAIRILVHSYKSSEWNQEVQNEVELQSKKDTSSIDKKRGHAGFLNQCIVLYKRSSVNMFRDLGYYWLRLVIYVALAISLGTIFYDLGISKGSIQDRGSLLSFVTGFLTFMTIGGFPSFVEDMKVFQRERENGHYGVVAFVIGNTFSSLPYLLLVSVIPGAITYYLPGLQKGCEHFLYFLCVLFSSLMLVESLMMIIASIVPNYLMGIITGAGIQGIMLLLGGFFKLPNDLPKVVWRYPLHYIAFHRYALQGLFKNEYEGLRFVIDKGGEGSHNYISGEEVLRNTWQTDMSCSKWVDLVILLGMIVLYRVLFFIIIKTIEKVKPIVGSLSCMSMSPKQTIEVVENPNATPIHEEV 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi897g00004 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 300 IPR027417 -
Sebi897g00004 696 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 309 IPR003439 GO:0005524
Sebi897g00004 696 Pfam ABC-2 type transporter 266 320 IPR043926 GO:0140359
Sebi897g00004 696 FunFam ABC transporter G family member 11 60 351 - -
Sebi897g00004 696 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 54 673 - -
Sebi897g00004 696 Pfam ABC transporter 84 234 IPR003439 GO:0005524
Sebi897g00004 696 MobiDBLite consensus disorder prediction 1 23 - -
Sebi897g00004 696 ProSitePatterns ABC transporters family signature. 206 220 IPR017871 GO:0005524|GO:0016887
Sebi897g00004 696 Pfam ABC-2 type transporter 388 599 IPR013525 GO:0016020|GO:0140359
Sebi897g00004 696 Gene3D - 63 301 IPR027417 -
Sebi897g00004 696 SMART AAA_5 92 281 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi897g00004 Sebi-Chr897 173259 179079 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi897g00004 82 294 Calmodulin-binding Proteins AT2G36910 28.311 6.95e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi897g00004 K05681 - gmx:100794527 1055.43