Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi897g00003 ATGAGTTCTCTTCTTCAATCCCATGCTAGTGATAGTGAACCAAACAATAGCTCTAAAATTCTGCCAACCATTGTGGAATTTGAGACCACATTTGAGGTTGAAGCTATTAAATCAGTAGAAAATGGCAAAGTTGCTCAGGAAGAACAAGAGAAAGGCATTTTCTTGACATGGGAGGATCTGTGGGTGACTGTTTCAAATGGAAAGAATGGAAGGAAACCAATACTTCAAGGTCTAAAAGGCTATGCCAAACCAGGACAACTCTTGGCTATAATGGGTCCTTCTGGTTGTGGAAAGTCCACACTTCTTGATACTTTAGCAGGAAGACTAGGTTCAAAGACAAAACAAGCAGGGAAGATCCTAATCAATGGCCGCAAACAAGCACTGGCTTATGGAACATCTGCATATGTAACAGAAGATGATACTATTTTGACAACTCTAACAGTTGGAGAAGCTGTATACTACTCAGCTTACCTCCAATTGCCAGATTCAATGTCAAAATCAGAGAAACAAGAGAGAGCAGATTTCACAATCAGAGAAATGGGTCTGCAAGATGCCATTAACACCAGAATTGGAGGGAGAGGATTGAAAGGCATAAGTGGGGGGCAAAAGAGGAGAGTTAGCATTTGCATTGAGATCTTAACACATCCAAGGCTTCTCTTCCTTGATGAACCCACTAGTGGACTTGATAGTGCAGCTTCTTATCATGTTATGAATAGAATATCTAGCTTAAACAAAAAGGATGGCATTCAAAGGACTATTATTGCATCAATCCATCAGCCAAGTAATGAAATTTTTCAACTTTTCCGCAACCTTTGTCTTCTCTCTTCAGGGAAAACAGTATACTTTGGACCTGCCTCTGCTGCAAATAAGTTTTTCTCATCAAATGGTTTTCCCTGTCCAAGTCTCCAGTATCCTTCTGATCACTTCATTAAAACCATTAACAAGGATTTTGAACAGGACCCTGAGAAAGGATTGGGTGGAGGGCTAAGCACAGAAGAAGCAATTCATATTCTTGTTAAATCATATGATTCATCTGAAATTAGTTACCAAGTTCAAAAAGAAATAGCTCAAATAAAAAAAAGGGACTCTGGCACAATTGAGAAGAAAAGTCATGCTGACTTTTATACTCAGTGCCTCATTCTTACAAGAAGATCCTTTGTGAATATGTACCGTGAAGTAGGCTATTACTGGTTGCGCCTACTTATCTATGGTGCCTTGGCTTTAAGTCTTGGTACCATGTTCTTTGACATTGGTTCAAGCAGTGAATCAATTCAGGCCAGAGGTTCACTGCTTGTGTTTGTTGTTACATTCCTGACCTTCATAACTGTTGGTGGGTTCCCTTCTTTTGTGGAGGATATGAAGGTGTTTGAACGAGAAAGACTTAATGGACATTATGGTGTCACTGCATTTACCATTGGCAACACATTATCTTCTATTCCATTCTTGCTGTTGATGTCACTGATCCCAGGAGCACTGGTTTATTACCTAGCTGGACTTCAACAAGGACATGAACTATTTGTGTACTTTGTATCAGTGCTTTTTATTTCTGTCTTCTTGGTTGAGGGTCTCATGATGATTGTTGCAAGTATGGTCCCCAATTTCCTAATGGGCATAATAATTGGTTCTGGAATACTTGGTGTAATGATGTTAGATGGAGGGTTTTATAGACTACCAAGTGATATTCCTAAGCCCTTTTGGAGATACCCTTTACACTACATCTCATTCCACAAATATGCCTACCAAGGATTGTTCAAGAATGAGTTTCAAGGACTAACATTCACTAGCAATCAAGTTGGTGGTCCTGTGACAATTAGTGGTGAACATATACTGACACACATATGGCAAGTGGAAATGACTTACTCAAAGTGGGTGGATGTTGCTATCTTGGTAGTAATGGCAGTAGTTTATAGAATTCTGTTTTTGGTTATCATCAAGAGCTTTGAGAAGGTGAAGCCTATTGTTGCAGCAGTTAATTGTCCACAAGCAAATTTCAGGTTCACTAAAGTGACAAGGAGCAGTGAGACTGATTAG 2031 0.3949 MSSLLQSHASDSEPNNSSKILPTIVEFETTFEVEAIKSVENGKVAQEEQEKGIFLTWEDLWVTVSNGKNGRKPILQGLKGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSKTKQAGKILINGRKQALAYGTSAYVTEDDTILTTLTVGEAVYYSAYLQLPDSMSKSEKQERADFTIREMGLQDAINTRIGGRGLKGISGGQKRRVSICIEILTHPRLLFLDEPTSGLDSAASYHVMNRISSLNKKDGIQRTIIASIHQPSNEIFQLFRNLCLLSSGKTVYFGPASAANKFFSSNGFPCPSLQYPSDHFIKTINKDFEQDPEKGLGGGLSTEEAIHILVKSYDSSEISYQVQKEIAQIKKRDSGTIEKKSHADFYTQCLILTRRSFVNMYREVGYYWLRLLIYGALALSLGTMFFDIGSSSESIQARGSLLVFVVTFLTFITVGGFPSFVEDMKVFERERLNGHYGVTAFTIGNTLSSIPFLLLMSLIPGALVYYLAGLQQGHELFVYFVSVLFISVFLVEGLMMIVASMVPNFLMGIIIGSGILGVMMLDGGFYRLPSDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLTFTSNQVGGPVTISGEHILTHIWQVEMTYSKWVDVAILVVMAVVYRILFLVIIKSFEKVKPIVAAVNCPQANFRFTKVTRSSETD 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi897g00003 676 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 290 IPR027417 -
Sebi897g00003 676 Pfam ABC transporter 77 226 IPR003439 GO:0005524
Sebi897g00003 676 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524|GO:0016887
Sebi897g00003 676 Pfam ABC-2 type transporter 258 321 IPR043926 GO:0140359
Sebi897g00003 676 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 46 657 - -
Sebi897g00003 676 SMART AAA_5 84 278 IPR003593 GO:0016887
Sebi897g00003 676 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 301 IPR003439 GO:0005524
Sebi897g00003 676 FunFam ABC transporter G family member 11 53 341 - -
Sebi897g00003 676 Gene3D - 55 318 IPR027417 -
Sebi897g00003 676 Pfam ABC-2 type transporter 376 588 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi897g00003 Sebi-Chr897 138289 141633 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi897g00003 74 236 Calmodulin-binding Proteins AT2G36910 29.341 7.43e-10 60.5