Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi897g00001 ATGGGAGGTCATCAGCTAGAAAAGGGTGAGATTACTGTGACATGGGAGAATTTGGAGGCAACAGTTACAAATGGAAAGAATAGAAAAGTAATTCTGCATGGACTCACAGGTTATGCGCAGCCAGGGAAGCTTTTGGCTATAATGGGTCCTTCAGGCTGTGGCAAATCCACACTTCTTGATGCTTTAGCAGGAAGATTGAGATCAAACATAAAGCAATCAGGGAAGATCCTAATCAATGGCCACAAACAGGAACTGGCTTATGGAACATCAGTAAGAGACAATTTCCAAAAAGATAAAGATAATAATAATAAAACTGGGGAAACTCTATACTACTCAGCTCAGCTTCAATTTCCAGATTCTATGTCCATAACAGAGAAGAAAGAACAAGCAGACATCATACTCAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTAAGTGGGGGGCAAAAGAGGAGACTCAGCATTTGCATTGAGATTCTAACACGCCCCAGACTTCTATTCCTTGATGAACCAACTAGTGGCCTTGATAGTGCTGCTTCCTATTATGTTATGAGTAGAATTGCAAGTGAAACAGTATATTTTGGTCCTGCCCCTGATGCAAATCAGTTTTTTGCTACAAATGGTTTTCCTTGCCCAACTCTCCACAATCCTTCTGATCACTACTTAAGGATCATCAACAAAGATTTCGAACAGGATGCTGAAGAAGGCTTTGGTAAACGAGTAACTACTGAAGAAGCAATTGACATACTTGTAAAATCTTATAAGTCGTCTGAAATCAGAAATCAAGTTCGGAATGAAGTGGCAAAAATAAGTGAAAGTGAATCGAGTGCAGTAGGGAAGAAGAGGACCCACGCAGCATTCCTGAGTCAGTGCATGGTTTTGATAAAAAGATCTTCGCTCCAAATATACCGTGACATGAGCAATTACTGGTTACGTCTTGCTGTCTTTATTGCAATAGCTTTAAGCCTTGGCTCTATCTTCTACCACATCGGCCCCAGTAAAGGATCTATTCAGGAAAGAGGATCGCTGCTTACTTTTTTTATGTCAGTTCTGACTTTCATGACACTCATTGGTGGATTCTCTCCGTTAATAGAAGAAATGAAGGTATTTGAAAGAGAGAGATTGAATGGGCATTATGGTGTTATTGCTTTTCTCATTGGCAACATATTCTCTGCTATTCCTTACATGCTAATGATCTCTCTTATTCCTGGAGCAATAGTTTATTACCTTTCTGGATTGCACAGAGGAATGGAACACTTTCTTTACTTTGCATCTGTCTTATTTGCCATTGTTATGTGGGTTGAGAGTCTCATGATGGTTGTGGGTAGCATCTTCCCAAATTTTGTAATGGGTGTGATCATTGCTGGTGGGGTTGAAGGACTTGCCATTTTAACTGGTGGATTCTATAGACTGCCAAACGATCTTCCCAAACCATTATGGAAATACCCTTTCTATTATGTTTCCTTCCTCACTTATGCTTTCCAAGGATCTTTCAAGAATGAATTTGAAGGCTTAAAATTTGTTTTATATCAAGATGGAGGTGCCAAAGCTGTTAGTGGTACACAAGTATTGGCCGGGACATGGCACGTGCAAATGGGTCACTCAAAGTGGGTAGATCTTGTGATAATGTTTGGAATGATTGCTATGTATCGAGTTTTATTTTTGGCTATCACTAAAAGTAAGGAGAAGTCCAAACCTTTTGTTGCCATTAATGTTCCCCAAACAAAGATATTTTCTAAAACCAACATGGATGAACTATAG 1791 0.3992 MGGHQLEKGEITVTWENLEATVTNGKNRKVILHGLTGYAQPGKLLAIMGPSGCGKSTLLDALAGRLRSNIKQSGKILINGHKQELAYGTSVRDNFQKDKDNNNKTGETLYYSAQLQFPDSMSITEKKEQADIILREMGLQDAINTRVGGWGSKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASETVYFGPAPDANQFFATNGFPCPTLHNPSDHYLRIINKDFEQDAEEGFGKRVTTEEAIDILVKSYKSSEIRNQVRNEVAKISESESSAVGKKRTHAAFLSQCMVLIKRSSLQIYRDMSNYWLRLAVFIAIALSLGSIFYHIGPSKGSIQERGSLLTFFMSVLTFMTLIGGFSPLIEEMKVFERERLNGHYGVIAFLIGNIFSAIPYMLMISLIPGAIVYYLSGLHRGMEHFLYFASVLFAIVMWVESLMMVVGSIFPNFVMGVIIAGGVEGLAILTGGFYRLPNDLPKPLWKYPFYYVSFLTYAFQGSFKNEFEGLKFVLYQDGGAKAVSGTQVLAGTWHVQMGHSKWVDLVIMFGMIAMYRVLFLAITKSKEKSKPFVAINVPQTKIFSKTNMDEL 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi897g00001 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 199 IPR027417 -
Sebi897g00001 596 Gene3D - 5 202 IPR027417 -
Sebi897g00001 596 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 200 584 - -
Sebi897g00001 596 Pfam ABC transporter 33 183 IPR003439 GO:0005524
Sebi897g00001 596 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524|GO:0016887
Sebi897g00001 596 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 13 259 IPR003439 GO:0005524
Sebi897g00001 596 Pfam ABC-2 type transporter 300 512 IPR013525 GO:0016020|GO:0140359
Sebi897g00001 596 SMART AAA_5 41 247 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi897g00001 Sebi-Chr897 9949 18432 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi897g00001 31 193 Calmodulin-binding Proteins AT2G36910 29.282 1.51e-09 59.3