Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi896g00016 ATGGATACGAATCCTTTCAATTTTTCACATATGGATATGCAAGTTGATTTCATTCCAGATAATATACCGGTAACACATTTTGACTCTCTTGATGACATGCCACAATCTACTGTTGTTGATGAACCCCATGTCGAGCCTTATGTTGGGATGGAATTCAATTCATTAGAAGAAGTTGTAGGATTTTATAATTCATTTGCAAAGGCAAAATGGTTTGGGATTCGTACTCGCTCTAGTAAAAAGAATTATTGCATTTCGGTATGTGTTAGGGAAGGTGAACGTCCGGTGAAAAGTGATAAAAATGAAAAGGATAATGGCATCATGAGAGGAGTTAAGAGAAAATGCTCAACCATGAGCATGAGATGTCAAGCGTCAATTACTGTGTCAAAGGATGAGAAACGAGATAAATGGGTTATAAAATCTTTTGATAATAATCACAATCATGTCATGGCTAGTCCTAAGAGTGTGTCTTATTTAAGGTGTCATAAAAAAATGAGTATTGCTGCAAAAAAACTTGTTGAGAAGTTTAGTGAAGAAGGTTTACCTACTGGAAAGGTTGCTTCAATGTTTGATGGTAGTGGTTTAGCTTTTTCTAATAGAGATTGTTAG 606 0.3531 MDTNPFNFSHMDMQVDFIPDNIPVTHFDSLDDMPQSTVVDEPHVEPYVGMEFNSLEEVVGFYNSFAKAKWFGIRTRSSKKNYCISVCVREGERPVKSDKNEKDNGIMRGVKRKCSTMSMRCQASITVSKDEKRDKWVIKSFDNNHNHVMASPKSVSYLRCHKKMSIAAKKLVEKFSEEGLPTGKVASMFDGSGLAFSNRDC 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi896g00016 201 Pfam FAR1 DNA-binding domain 61 149 IPR004330 -
Sebi896g00016 201 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi896g00016 Sebi-Chr896 286607 287212 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi896g00016 FAR1 1.3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi896g00016 - - vvo:131657854 234.187