Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi896g00014 ATGATGGCGTTCCTGCAGAATGGTGCGCGACGACCGGGGACTGAGTTGCACGGAGAAGAACATGGCGACATTGCAACGGTGGTGCTATCGAGGTGGCTAATAGGGGACTGGCCGAACAGATCTTCTAGTTTTAGGAATGGATTTGTAGGAACTTGGGACCACTCATTTGAAAGTAGATTGCCTCTTGGTGGACCATTGTTGAAACAAAACATTGCAGACATGATACTTGAAAAAGGTATGGTTGAAATTCAACACTATCTCCAACTCTTCTTCCTCTGGCTCCTCTCCACCATTGTAGTTCGAGCCATACTCACCAGAAAGCAGAGAAAGAGTAATCGTCCACCAGGCCCTCCATCATTACCTATCATTGGACACTTTCACCTTATTTCTGACTTACCTCACCAAAGTTTTCACAACCTCTCATCTCGCTATGGCCCCATCATGCAGATTTACCTTGGCTCTGTGTCTTGTGTAGTAGTTTCTACACCTGAAATCGCCAAGGAGTTTCTCAAAACCAACGAAACATTCTTCTCCAGCCGCTTTGTTAGTGCTGCAGTTCACTACCTATCATATGGCTTAAAGGGGTTCTTGTTCGCTCCTTATGGAGAACAATGGAAGCTCATGAAGAAGCTCTGCATGTCAGTTCTTCTTGGTGGCAGAACACTTGATCAGCTTCTTCCTGTGAGGCAACAAGAGACTGTGAGGTTTCTGAGACTTCTTCAGAAGAAAGGGGAAGCAGGTGAAGCTGTTGATGTTGGTGGTGAGCTCTTGACTCTAAACAATAGTATCATATCAAGGATGACTATGAGCAGAACATGCTCTGAAAATGATGGTGATGTGGAAGACATTAGGAAGATGGTGGAGGACACTGCAGAGCTAGCAGGGAAGTTTAATGTGTCTGATTATATTTGGTTTTGTAAGTATTTGGATTTTCAGGGAATGAACAAAAGGCTTAAAGAAATTATGGACAGATTTGACACCATGATGGAGAGGGTGATAGAGGAGCATCAAGTGGAATGGAAGAAGGAAAGGGGTGAAGGTGCTCAAATTAGGGATTTGCTTGATATTTTGTTGGAAATACATGAAGATGAGAGCACTGAGATAAAATTGACCAGAGTGAATATCAAGGCTTTCATCTTGGACATATTTATGGCAGGAACCGACACATCCGCTATAACCATTGAATGGGCTCTGGCTGAGTTAATCAACCATCCTCATGTGATGGAGAAAGCAAGACAAGAGATTGATTCAGTAATTGGAAAGAGCAGGTTAATACAAGAGTCAGATCTTCCCAACCTTCCTTATTTACGAGCTATAGTCAAAGAAACACTAAGGATTCACCCTACAGTACCACTTCTAGGGAGGGAATCATCTGAAAGCTGTAATGTTTGTGGCTATGAGATTCCAGCAAAGTCCTTGTTACTTGTTAATCTGTGGTCTATGGGTAGGGACCCCAACCTGTGGGAGGACCCACTTGAGTTCAGGCCAGAGAGGTTTATGAGTGAAGAGAATCAGTTAGATGTGAGGGGACGGAATTTTCAATCAATGCCATTTGGGACAGGAAGAAGGGTGTGTCCTGGTGTCTCACTTGCACTTCAGACTGTACCCACGAATCTTGCAGCTATGATTCAATGTTTTGAATGGAAGGTTGATGGGGCAGTTAACATGGAAGAGAAATCAGCCATGACCCTTCTAAGGGCTCATTCTTTGGTTTGTGTCCCTGTGCCTCGCTTTAATGCCATTCCTTCAAGCATATAG 1758 0.4391 MMAFLQNGARRPGTELHGEEHGDIATVVLSRWLIGDWPNRSSSFRNGFVGTWDHSFESRLPLGGPLLKQNIADMILEKGMVEIQHYLQLFFLWLLSTIVVRAILTRKQRKSNRPPGPPSLPIIGHFHLISDLPHQSFHNLSSRYGPIMQIYLGSVSCVVVSTPEIAKEFLKTNETFFSSRFVSAAVHYLSYGLKGFLFAPYGEQWKLMKKLCMSVLLGGRTLDQLLPVRQQETVRFLRLLQKKGEAGEAVDVGGELLTLNNSIISRMTMSRTCSENDGDVEDIRKMVEDTAELAGKFNVSDYIWFCKYLDFQGMNKRLKEIMDRFDTMMERVIEEHQVEWKKERGEGAQIRDLLDILLEIHEDESTEIKLTRVNIKAFILDIFMAGTDTSAITIEWALAELINHPHVMEKARQEIDSVIGKSRLIQESDLPNLPYLRAIVKETLRIHPTVPLLGRESSESCNVCGYEIPAKSLLLVNLWSMGRDPNLWEDPLEFRPERFMSEENQLDVRGRNFQSMPFGTGRRVCPGVSLALQTVPTNLAAMIQCFEWKVDGAVNMEEKSAMTLLRAHSLVCVPVPRFNAIPSSI 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi896g00014 585 Gene3D Cytochrome P450 98 572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS E-class P450 group I signature 437 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS E-class P450 group I signature 141 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS E-class P450 group I signature 477 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS E-class P450 group I signature 394 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS E-class P450 group I signature 165 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS E-class P450 group I signature 515 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS E-class P450 group I signature 525 548 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS E-class P450 group I signature 374 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 Pfam Cytochrome P450 114 560 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 SUPERFAMILY Cytochrome P450 114 577 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 FunFam Cytochrome P450 family protein 105 572 - -
Sebi896g00014 585 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS P450 superfamily signature 516 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS P450 superfamily signature 525 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 PRINTS P450 superfamily signature 385 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi896g00014 585 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 518 527 IPR017972 GO:0005506|GO:0016705
Sebi896g00014 585 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 90 568 - -
Sebi896g00014 585 CDD CYP93 145 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi896g00014 Sebi-Chr896 259511 264726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi896g00014 80 577 Cytochrome P450 AT5G06900 48.800 7.87e-174 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi896g00014 K24188 - gmx:100805931 766.148