Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi895g00014 ATGGCGGCTTCCGTCGACAACCGTCCATACACTAGCCTCCAACACGGCGTCGTTCGCACCTTCAAGCCAATCCCTGAGGTCATGCGTGTCAAGAAGACACCGGAACCGCTGTTGCTATCCGATTCCTCAAGCGATGAGGAAGATGGAAATAATCTGAAGGACCTGATTCGAAAGGGAAACACCGAAGTTGAAGCCTCCATCTTCGACTCTCGCGATGAGGGAACTTCAGACCACTGGATCCAACGAAACGCCTCCCTTGTCCGTCTCACTGGCAAGCATCCCTTCAACTCAGAGCCACCACTTTCACGCCTAATGCACCACGGCTTCATCACTCCCGTCCCACTCCACTATGTTCGCAACCATGGGCCTGTTCCCAAGGCCCAATGGGAAGACTGGACCGTTGAAGTCTGTGGCCTTGTCAAGCACCCGGCCCGTTTCACCATGGACCAGTTGGTCCACGACTTCCCTAGCCGTGAATTCCCTGTCACGCTCGTCTGCGCCGGGAACCGCCGCAAGGAACAGAACATGGTGAAGCAGAGCATCGGTTTCAACTGGGGCGCTGCTGCAATCTCCACTTCGGTGTGGCGCGGTGTACCGTTGAGGAGCCTGCTCAAGCGATGTGGGATCTATAGCCGCACGAAAGGGGCCTTACACGTGTGCTTCGAAGGCGCTGAGGAACTGCCAGGTGGCGGTGGGTCCAAGTACGGGACAAGTATCCTGAGGGAGGTTGCACTGGATCCCTCCCGCGACATCATTCTTGCCTACATGCAAAACGGTGAGCTTTTGGCCCCTGATCACGGTTTCCCCGTACGGATCATAATACCTGGTTTCATTGGAGGCCGCATGGTGAAATGGTTGAAACGCATCATTGTTACTCCTCAACAATCTGACAGTTATTACCATTACAAGGACAATAGAGTACTCCCCTCTCATGTTGATGCTGAGCTTGCCAATGCAGAAGCTTGGTGGTACAAGCCTGAGTATATTATCAACGAGCTCAACATTAACTCGGTGATAACGACGCCGTGCCACGATGAGATATTGCCGATCAACTCATGGACCACTCAGAGGCCTTATGTACTTCGAGGCTACTCATATTCCGGGGGTGGTAGAAAGGTGACACGTGTAGAGATAACAATGGACGGTGGTGAAACGTGGCAGGTATGCAGGTTGGATCATCCAGAGAAACCCAACAAATACGGTAAATATTGGTGTTGGTGTTTCTGGTCCTTGGAGGTTGAGGTATTGGACTTGCTTGGAGCCAAGGAGATTGCGGTGCGTGCGTGGGACGAGGCCCTCAACACCCAGCCTGAGAAGCTCATTTGGAATGTTATGGGCATGATGAACAATTGTTGGTTTAGAGTGAAAACTAATGTGTGCAAGCCCCACAAGGGTGAGATTGGCATAGTGTTTGAGCATCCGACCCAACCGGGCAACCAATCTGGTGGCTGGATGGCTAAAGAAAAACATTTGGAGAAATCATTAGAATCTAATTCAACCCTCAAGAAGAGTGTTTCATCACCGTTTATGAACACTAGCTCAAAAATGTACACCATGTCTGAAGTCAAAAAGCATAATAGCTCTGACTCATGTTGGATCATTGTCCATGGCCATGTCTATGATTGTACCCGCTTCCTCAAAGAACACCCTGGAGGTGCCGACAGCATCCTCATAAACGCCGGTACCGACTGTACGGAAGAGTTTGAAGCTATCCACTCCGACAAAGCCAAGAAAATGATTGAGGATTACCGAATTGGTGAACTCATGACAACCAACTATTCCTCTGATTCATCCAATTCATCACCAAATAACTCGGTGCATGGCAATTTGGCCCCCATCAAGGAAGTTATAGCTTTAAACCCACGTGAGAAAATCCCATGCAAGCTCCTATCCAAAACGTCCATCTCCCATGACGTTAGGATCTTTCGTTTTGCATTACCTTCTGAGGACCAACTCTTGGGTTTACCGGTAGGGAAGCACATATTCTTATGCGCCACCATAGATGAGAAGCTATGCATGCGAGCTTACACTCCTATAAGCACCGTGGATGAAGTAGGGTACTTCGATCTAGTGGTCAAGGTTTATTTCAAAGGGGTGCACCCAAAGTTCCCAAATGGTGGGCTCATGTCTCAACATTTGGACTCGCTGCCTATTGGCTCGTTCTTGGAAGTGAAAGGCCCATTGGGCCATGTAGAGTATAGTGGTAAAGGCAACTTTCTTGTTCACGGGAAACATAAGTTTGCGAAGAGGCTAGCCATGTTCGCTGGTGGGACTGGGATCACACCCATTTACCAAGTGGCCCAAGCAATTCTGAAGGACCCAGAGGATCACACTGAAATGCACCTTATATATGCGAACCGGACAGAGGATGATATATTATTGAGGGAAGAGCTTGATGCGTGGGCGAAAAATCATGAACGGTTCAACGTGTGGTACGTGGTACAAGAAAGCGTAAGAGAAGGGTGGGAATATAGTGTAGGATTCATCACCGAAAGTATCATGGAGAAACATGTCCCTCAAGCATCTCATGATACACTGGCATTGGCTTGTGGACCACCTCCCATGATTCAGTTTGCAGTGCAGCCAAATTTGGAGAAGTTGGGCTATGACATCAAGAACAACTTGCTCTTATTTTAG 2637 0.493 MAASVDNRPYTSLQHGVVRTFKPIPEVMRVKKTPEPLLLSDSSSDEEDGNNLKDLIRKGNTEVEASIFDSRDEGTSDHWIQRNASLVRLTGKHPFNSEPPLSRLMHHGFITPVPLHYVRNHGPVPKAQWEDWTVEVCGLVKHPARFTMDQLVHDFPSREFPVTLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWRGVPLRSLLKRCGIYSRTKGALHVCFEGAEELPGGGGSKYGTSILREVALDPSRDIILAYMQNGELLAPDHGFPVRIIIPGFIGGRMVKWLKRIIVTPQQSDSYYHYKDNRVLPSHVDAELANAEAWWYKPEYIINELNINSVITTPCHDEILPINSWTTQRPYVLRGYSYSGGGRKVTRVEITMDGGETWQVCRLDHPEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEALNTQPEKLIWNVMGMMNNCWFRVKTNVCKPHKGEIGIVFEHPTQPGNQSGGWMAKEKHLEKSLESNSTLKKSVSSPFMNTSSKMYTMSEVKKHNSSDSCWIIVHGHVYDCTRFLKEHPGGADSILINAGTDCTEEFEAIHSDKAKKMIEDYRIGELMTTNYSSDSSNSSPNNSVHGNLAPIKEVIALNPREKIPCKLLSKTSISHDVRIFRFALPSEDQLLGLPVGKHIFLCATIDEKLCMRAYTPISTVDEVGYFDLVVKVYFKGVHPKFPNGGLMSQHLDSLPIGSFLEVKGPLGHVEYSGKGNFLVHGKHKFAKRLAMFAGGTGITPIYQVAQAILKDPEDHTEMHLIYANRTEDDILLREELDAWAKNHERFNVWYVVQESVREGWEYSVGFITESIMEKHVPQASHDTLALACGPPPMIQFAVQPNLEKLGYDIKNNLLLF 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi895g00014 878 FunFam Nitrate reductase 510 591 - -
Sebi895g00014 878 FunFam Nitrate reductase 332 508 - -
Sebi895g00014 878 FunFam NADH-cytochrome b5 reductase 613 728 - -
Sebi895g00014 878 SUPERFAMILY E set domains 332 459 IPR014756 -
Sebi895g00014 878 Pfam Oxidoreductase molybdopterin binding domain 121 300 IPR000572 -
Sebi895g00014 878 Gene3D - 332 508 - -
Sebi895g00014 878 Pfam Oxidoreductase NAD-binding domain 753 860 IPR001433 GO:0016491
Sebi895g00014 878 MobiDBLite consensus disorder prediction 32 52 - -
Sebi895g00014 878 FunFam Nitrate reductase [NADH] 729 878 - -
Sebi895g00014 878 CDD eukary_NR_Moco 72 457 - -
Sebi895g00014 878 PIRSF Nitr_rd_NADH 10 877 IPR012137 GO:0006809|GO:0042128|GO:0050464
Sebi895g00014 878 PRINTS Cytochrome B5 signature 549 563 IPR001199 -
Sebi895g00014 878 PRINTS Cytochrome B5 signature 564 571 IPR001199 -
Sebi895g00014 878 PRINTS Cytochrome B5 signature 576 588 IPR001199 -
Sebi895g00014 878 PRINTS Cytochrome B5 signature 539 549 IPR001199 -
Sebi895g00014 878 Gene3D - 71 322 IPR036374 -
Sebi895g00014 878 Pfam Oxidoreductase FAD-binding domain 627 733 IPR008333 -
Sebi895g00014 878 PANTHER SULFITE REDUCTASE 58 462 - -
Sebi895g00014 878 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 512 592 IPR036400 -
Sebi895g00014 878 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 514 589 IPR001199 -
Sebi895g00014 878 Gene3D - 729 878 IPR039261 -
Sebi895g00014 878 Pfam Cytochrome b5-like Heme/Steroid binding domain 518 588 IPR001199 -
Sebi895g00014 878 Gene3D - 510 590 IPR036400 -
Sebi895g00014 878 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 722 872 IPR039261 -
Sebi895g00014 878 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 622 734 IPR017927 GO:0016491
Sebi895g00014 878 CDD cyt_b5_reduct_like 627 878 - -
Sebi895g00014 878 Pfam Mo-co oxidoreductase dimerisation domain 328 459 IPR005066 GO:0016491|GO:0030151
Sebi895g00014 878 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 138 173 IPR022407 GO:0043546
Sebi895g00014 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 674 681 IPR001709 GO:0016491
Sebi895g00014 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 790 801 IPR001709 GO:0016491
Sebi895g00014 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 822 838 IPR001709 GO:0016491
Sebi895g00014 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 778 787 IPR001709 GO:0016491
Sebi895g00014 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 752 771 IPR001709 GO:0016491
Sebi895g00014 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 548 558 IPR001709 GO:0016491
Sebi895g00014 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 846 854 IPR001709 GO:0016491
Sebi895g00014 878 SUPERFAMILY Riboflavin synthase domain-like 615 734 IPR017938 -
Sebi895g00014 878 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 545 552 IPR018506 GO:0020037
Sebi895g00014 878 Gene3D Translation factors 614 728 - -
Sebi895g00014 878 SMART Cyt_b5_2 517 589 IPR001199 -
Sebi895g00014 878 FunFam Nitrate reductase 73 322 - -
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 375 387 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 440 453 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 173 185 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 263 276 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 109 125 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 361 375 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 246 262 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 427 439 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 87 101 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 188 203 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 279 292 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 162 173 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 330 342 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Eukaryotic molybdopterin domain signature 402 412 IPR008335 GO:0016491
Sebi895g00014 878 PRINTS Cytochrome B5 reductase signature 846 854 - -
Sebi895g00014 878 PRINTS Cytochrome B5 reductase signature 752 771 - -
Sebi895g00014 878 PRINTS Cytochrome B5 reductase signature 719 733 - -
Sebi895g00014 878 PRINTS Cytochrome B5 reductase signature 674 681 - -
Sebi895g00014 878 PRINTS Cytochrome B5 reductase signature 790 801 - -
Sebi895g00014 878 PRINTS Cytochrome B5 reductase signature 653 664 - -
Sebi895g00014 878 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 70 330 IPR036374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi895g00014 Sebi-Chr895 246317 250018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi895g00014 614 869 NADPH P450 reductases AT5G17770 40.927 1.69e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi895g00014 K10534 - gmx:732634 1568.52