Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi895g00011 ATGTTCAACGATATCAGACTAAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAGCTTGCAGATTTTGGACTAGCAAAGGCAACCAAATTGAATGATGTTAAATCATGCAAGGGGACAGCATTCTGGATGGCCCCTGAGGTTGTGAAGGGAAGGAACCAAGGTTACGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTGCTTGAGATGCTCACGGGCCAAATTCCCTACTCTGATTTTGAATGTATGCAGGCACTATTTAGAATTGGAAAGGGCGAGCGACCTCCTATTCCTGACTCTCTTTCAAGAGATGCAAGGGATTTTATCCTGCAGTGCCTTCAAGTTAATCCGGGTGATCGTCCCACTGCTGGTCAACTCTTAAACCATCCATTTGTCCAAAGGCCAGTTTCCCAGTCCTCTGGTTCCTCGTTTCCTTACATTCATGGCAGAAAGAGTTAA 480 0.4521 MFNDIRLRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCKGTAFWMAPEVVKGRNQGYGLPADMWSLGCTVLEMLTGQIPYSDFECMQALFRIGKGERPPIPDSLSRDARDFILQCLQVNPGDRPTAGQLLNHPFVQRPVSQSSGSSFPYIHGRKS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi895g00011 159 Pfam Protein kinase domain 5 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi895g00011 159 Gene3D Transferase(Phosphotransferase) domain 1 3 151 - -
Sebi895g00011 159 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 8 147 - -
Sebi895g00011 159 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi895g00011 159 SMART serkin_6 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi895g00011 159 SUPERFAMILY Protein kinase-like (PK-like) 7 142 IPR011009 -
Sebi895g00011 159 FunFam Mitogen-activated protein kinase kinase kinase 19 34 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi895g00011 Sebi-Chr895 179567 181330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi895g00011 8 143 MAP Kinase Kinase Kinase AT4G08500 74.453 7.85e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi895g00011 Pkinase 6.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi895g00011 K13414 - gmx:100819999 289.271