Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi895g00005 ATGGCTGAGTTCATTGTAAAGAATGAGGTCAGAAAAGCTTTCAACAAGAATCCTGGAATTGCTGCTGGGCTTGTGAGGATGCATTTTCATGATTGCTTTATTAGAGGGTGTGATGCATCGGTGCTTCTTGATTCCACTCCCTCAAACACTGCAGAGAAAGACTCTCCAGCCAATAAACCAAGTCTTCGAGGGTTTGAAGTCATTGATAATGCTAAGGCTAGACTTGAAGCAGTGTGCAAAGGAATTGTTTCTTGTGCTGACATAGTTGCATTTGCAGCAAGGGATAGTGTGGAATTAGCTGGAGGGCTTGGCTATGATGTTCCTGCAGGAAGAAGAGATGGCAGAATATCACTAGCTTCAGATACAAGAACAGACTTACCTCCTCCAACTTTCAATGTTAAACAACTAACTCTCAACTCTTGCAAAGAAGGGTTTAACACAGGAAGAAATGGTCACTCTCTCTGCACGTTGAAGCGGCAATGTCCCCAAGGTAATACAAACCCAAACTTGGTGGTTCCAATGGATCCTTCTAGCCCTGGAATTGCAGATGTAGGGTACTATATTGATATCTTGGCAAACAGAGGCCTGTTCACATCTGATCAGGCTCTCTAA 612 0.4346 MAEFIVKNEVRKAFNKNPGIAAGLVRMHFHDCFIRGCDASVLLDSTPSNTAEKDSPANKPSLRGFEVIDNAKARLEAVCKGIVSCADIVAFAARDSVELAGGLGYDVPAGRRDGRISLASDTRTDLPPPTFNVKQLTLNSCKEGFNTGRNGHSLCTLKRQCPQGNTNPNLVVPMDPSSPGIADVGYYIDILANRGLFTSDQAL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi895g00005 203 Pfam Peroxidase 6 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 Gene3D Peroxidase, domain 2 151 203 - -
Sebi895g00005 203 Gene3D - 2 126 - -
Sebi895g00005 203 ProSitePatterns Peroxidases active site signature. 21 32 IPR019794 GO:0004601
Sebi895g00005 203 PRINTS Haem peroxidase superfamily signature 101 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 PRINTS Haem peroxidase superfamily signature 83 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 PRINTS Haem peroxidase superfamily signature 21 35 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 PRINTS Plant peroxidase signature 23 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 PRINTS Plant peroxidase signature 82 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 PRINTS Plant peroxidase signature 101 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 PRINTS Plant peroxidase signature 63 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 PANTHER PEROXIDASE 25-RELATED 156 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 FunFam Peroxidase 1 139 - -
Sebi895g00005 203 SUPERFAMILY Heme-dependent peroxidases 2 203 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi895g00005 203 Gene3D Peroxidase, domain 2 127 147 - -
Sebi895g00005 203 ProSiteProfiles Plant heme peroxidase family profile. 1 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi895g00005 Sebi-Chr895 121320 122575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi895g00005 2 203 Peroxidase AT5G42180 43.460 2.05e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi895g00005 K00430 - gmx:100779031 322.013