Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi891g00019 ATGTCGCTGAACATGAAAACCCTAACCCAAGCATTGGCGAAGACCGCCGCGGTAATTGAGAAGAAAGTGCAGACCACGGTGCAGGAGGTAACAGGACCAAAGCCACTTCAGGACTATGAGCTCATCGACCAGATCGGCTCTGCAGGCCCCGGTCTGGCCTGGAGGCTATACTCAGCCCGGGCCCGTGATCCCTCGCGCCAGCACCAGTATCCGGTTGTCTGCGTGTGGGTATTGGACAAGCGAGTTCTTTCCGAGGCCCGAATGCGTGCCGGGCTCACCAAAGCCGCCGAGGATTCCTTCTTAGATTTGATTCGAACCGATGCCGCTAAGCTCGTACGGCTCAGGCATCCAGGTGTGGTTCATGTCGTTCAGGCCCTCGATGAGAGCAAGAATGCAATGGCAATGGTTACCGAACCCTTGTTTGCTTCTGTTGCCAATACTCTTGGCAATGTGGACAATATTCCAAATGTTCCCAAAGAACTTAGGGGAATGGAAATGGGGCTGTTGGAGGTGAAACATGGTTTACTTCAGATAGCAGAATCCCTGGACTTTCTCCATAACCATGCTCATCTTATTCATCGAGCTATATCACCTGAGAATATTTTTATCACCTTGAGTGGAGCCTGGAAACTTGGTGGATTTGGTTTTGCAATTTCTGCTTCTCAGACCCCCGGTGACTCATCTAATCTGCAAGCCTTCCATTATGCTGAATATGATGTTGAAGACTCTATTTTGCCACTTCAGCCATCACTTAATTACACTGCTCCTGAGCTGGTGAGGAGCACTGCATCTTCAGCTGGGTGCCCTTCTGATATTTTCAGTTTTGGATGCCTTGCCTACCATTTAATTGCCCGCAAGCCTTTGTTTGATTGCCACAACAATGTGAAAATGTACATGAATACCTTGACTTACTTATCCAATGATGCTTTCTCATCTATCCCATCGGAACTGGTTCCTGACTTACAAAGGATGCTCTCTCCAAATGAGTCTTTCAGGCCAACTGCGATGGATTTTACAGGTTCACCATTTTTTCGGAATGACACTAGATTGCGTGCTTTGCGCTTCCTCGACCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTATCAGATATGTGGAAAGATTTTGATTCCCGTGTATTGCGATACAAGGTCCTACCCCCACTTTGTGCAGAACTTAGGAATGTGGTGATACAACCAATGATTCTACCAATGGTTCTAACCATTGCGGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTTCCAGCCCTTGTCCCTGTCTTAACTGCTGCTGCTGGTGAGACACTGTTACTACTTGTGAAGCACACCGACCTTATAGTAAACAAGACTAGTCAAGAGCATTTAATTTCACATGTTCTTCCAATGATTGTGCGGGCCTATGATGATACCGATGCACGTATACAAGAAGAGGTCCTGAAAAAATCTGTATCCCTTTCCAAGCAACTTGATGCACAGCTGGTGAAGCAAGTGGTTTTGCCCCGTGTTCATGGACTAGCACTTAAAACAACAATTGCTGCGGTTAGAGTCAATGCTTTGCTGTGCCTAGGAGACATGGTTAACCGACTTGATAAACATTCTGTCCTGGATATCTTGCAAACTATTCAGCGGTGTACTGCTGTTGACCGTTCTCCTCCAACCCTTATGTGTACCCTTGGGGTTGCAAATTCTATTTTTAAGCAGTATGGAGTAGAATTTGTGGCTGAGCATGTTCTTCCTTTACTTATGCCCCTCCTGACTGCTCAACAACTGAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCCATAAAATAGAAGAGAAGCGAGGAGTGGCTGTGACTGGTTCTGGAATCCCAGAGGCAAAACTATCTTCTGCAGTTAATGGCCTTCAAACCGATGCCTTGAGGACAAACAGCAACACTGTTGCTACTGCAACAGTTGCTACTGCAACAAAAAGCAACTCCACTTGGGATGAAGATTGGGGTCCCAAAACAAAGAGAACTGCCTCTTCTATCCAGAATTCTATTGATACATCCAATCAATCTGTGGCAGGCAACCCTGTTGGTCAAGTAACATCTTTACAAAATCATTTGCCCTTGTCTGGTGTATCTAATCAGCAGACAACCAAGTCATGTCCCTCGGTAGATGTAGAGTGGCCGCCTCGTGCATCTGTTGGTGCTACCTCACAATTTGGTGATACTGAAAGGCATACAATTGCAGCAGGAACCCCATCCACATCTAATCTTGAAAATGATGATCCTTTTGCTGATTGGCCTCCGCGTCCTAGTGGCTCATTATCTGGTGGATCTGGAATTTCTAACAATGGTACCCTAGGAATGCCACTAAACAAATTGGGGTTTAATTCAATGACAAGCAATTCAAGCAATCTGGGTATCCAAAATAGCACCTGGTCTGTTAATTCCCAAAGTTCTGCGCAATCCAACAGTTTGAACCTAGGTAATACTAGTTCAGCCATTGGTAGCCTGAATAGTGGCTTTGATTCTCAGAATTCTCTTGGTTTCCTAAAACAAAGTCATGCTTCTTCAGCATCAAATGTTTCATATAATAACAACAGGTCAACAGATCTTGGGTCAATATTTTCTTCCCACAAGAATGAACAGATTGCACCCAAACTTGCGCCACCCCCTTCAACAACAGTAGGTAGAGGACGGGGAAGAGGGAGGGGAGCTGTTTCATCCGCTAAGCCCTCTCATACCAAGTCACCTGCTGAGCAGCCACCCCTTTTGGATTTGTTGGGGTAG 2796 0.4557 MSLNMKTLTQALAKTAAVIEKKVQTTVQEVTGPKPLQDYELIDQIGSAGPGLAWRLYSARARDPSRQHQYPVVCVWVLDKRVLSEARMRAGLTKAAEDSFLDLIRTDAAKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASVANTLGNVDNIPNVPKELRGMEMGLLEVKHGLLQIAESLDFLHNHAHLIHRAISPENIFITLSGAWKLGGFGFAISASQTPGDSSNLQAFHYAEYDVEDSILPLQPSLNYTAPELVRSTASSAGCPSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLTYLSNDAFSSIPSELVPDLQRMLSPNESFRPTAMDFTGSPFFRNDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALVPVLTAAAGETLLLLVKHTDLIVNKTSQEHLISHVLPMIVRAYDDTDARIQEEVLKKSVSLSKQLDAQLVKQVVLPRVHGLALKTTIAAVRVNALLCLGDMVNRLDKHSVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHVLPLLMPLLTAQQLNVQQFAKYMLFVKDMLHKIEEKRGVAVTGSGIPEAKLSSAVNGLQTDALRTNSNTVATATVATATKSNSTWDEDWGPKTKRTASSIQNSIDTSNQSVAGNPVGQVTSLQNHLPLSGVSNQQTTKSCPSVDVEWPPRASVGATSQFGDTERHTIAAGTPSTSNLENDDPFADWPPRPSGSLSGGSGISNNGTLGMPLNKLGFNSMTSNSSNLGIQNSTWSVNSQSSAQSNSLNLGNTSSAIGSLNSGFDSQNSLGFLKQSHASSASNVSYNNNRSTDLGSIFSSHKNEQIAPKLAPPPSTTVGRGRGRGRGAVSSAKPSHTKSPAEQPPLLDLLG 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi891g00019 931 Pfam Protein kinase domain 104 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi891g00019 931 SUPERFAMILY ARM repeat 314 607 IPR016024 -
Sebi891g00019 931 MobiDBLite consensus disorder prediction 712 732 - -
Sebi891g00019 931 MobiDBLite consensus disorder prediction 745 788 - -
Sebi891g00019 931 SUPERFAMILY Protein kinase-like (PK-like) 34 348 IPR011009 -
Sebi891g00019 931 Gene3D Transferase(Phosphotransferase) domain 1 103 348 - -
Sebi891g00019 931 MobiDBLite consensus disorder prediction 745 763 - -
Sebi891g00019 931 CDD PK_SCY1_like 45 346 - -
Sebi891g00019 931 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi891g00019 931 Gene3D - 349 621 IPR011989 -
Sebi891g00019 931 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi891g00019 931 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 38 919 - -
Sebi891g00019 931 MobiDBLite consensus disorder prediction 677 694 - -
Sebi891g00019 931 MobiDBLite consensus disorder prediction 883 931 - -
Sebi891g00019 931 MobiDBLite consensus disorder prediction 665 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi891g00019 Sebi-Chr891 265563 278005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi891g00019 72 345 AGC Kinase Gene Family AT3G10540 23.759 1.15e-09 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Sebi891g00019 Pkinase 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi891g00019 K17541 - gmx:100796211 1498.41