Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi88g00011 ATGGAGCTGCTTCCAGCAAAGCAACGAGCTCGAAAAATGCTGCAGGCGAGCAGCAAGGGGAGAGGTGGAAGAGGAAAGGGAACTATTCGAGCTAGTATGTCCAGCAGAATGACTGATGATAATCATTGGTCTTGTGAGCATTGTACCTATGCAAATGTCAAATCTGCCACCACATGCCAGATGTGCAATCAACAGCGTCGATGA 204 0.4804 MELLPAKQRARKMLQASSKGRGGRGKGTIRASMSSRMTDDNHWSCEHCTYANVKSATTCQMCNQQRR 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi88g00011 67 ProSitePatterns Zinc finger RanBP2-type signature. 43 62 IPR001876 -
Sebi88g00011 67 SUPERFAMILY Ran binding protein zinc finger-like 39 66 IPR036443 -
Sebi88g00011 67 SMART zf_4 41 65 IPR001876 -
Sebi88g00011 67 ProSiteProfiles Zinc finger RanBP2 type profile. 39 67 IPR001876 -
Sebi88g00011 67 MobiDBLite consensus disorder prediction 1 36 - -
Sebi88g00011 67 Gene3D - 36 67 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi88g00011 16 66 ARIADNE family AT1G65430 47.059 4.40e-08 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi88g00011 K11968 - vum:124843329 100.138