Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi889g00020 ATGGTTGTGGAAGATACCCCAAAATCTAGCATCACCGACGACCAAATCAGCAACAACCCTAGGGTTCTCGACGATAACGACGACCTCGAGGAAGGAGAGATCCTCAACGATGACGACTCCTCCGCCATTTCCAAGCCTCCCTCCGCCGTCGTCCGCCAACCCCATCCCCTCGAGAATTCATGGACCTTCTGGTTCGATAACCCTTCCGCCAAATCCAAGCAAGCCGCTTGGGGCAGCTCTATCCGACCCATCTACACCTTCGCCACCGTCGAGGAGTTTTGGAGCATTTACAATAACATACACCATCCCAGCAAGTTGGCTGTGGGAGCAGATTTTCATTGTTTCAAGCATAAAATTGAGCCGAAGTGGGAGGACCCAATCTGCGCTAATGGTGGGAAATGGACTATGACCTTTTCTAAGGGGAAATCTGATACCAGTTGGTTATATACGTTGTTGGCAATGATTGGAGAACAATTTGATCACGGAGATGAGATTTGCGGAGCAGTAGTGAATGTCAGAAATAGGCAGGAGAAAATTGCTCTTTGGACTAAGAATGCTTCAAATGAAGCTGCTCAGGTGAGCATTGGGAAACAGTGGAAGGAGTTTCTTGATTATAATGACACAATTGGCTTTATATTTCATGAGGATGCAAAGAAGCTTGACAGAGGTGCTAAAATAAATACGTCATATGAACTGTATAGCGTTCTTACATGGTAG 717 0.4644 MVVEDTPKSSITDDQISNNPRVLDDNDDLEEGEILNDDDSSAISKPPSAVVRQPHPLENSWTFWFDNPSAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLAVGADFHCFKHKIEPKWEDPICANGGKWTMTFSKGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRNRQEKIALWTKNASNEAAQVSIGKQWKEFLDYNDTIGFIFHEDAKKLDRGAKINTSYELYSVLTW 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi889g00020 238 SUPERFAMILY eIF4e-like 44 224 IPR023398 -
Sebi889g00020 238 MobiDBLite consensus disorder prediction 1 47 - -
Sebi889g00020 238 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 30 218 IPR001040 GO:0003723|GO:0003743|GO:0006413
Sebi889g00020 238 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 229 IPR023398 -
Sebi889g00020 238 ProSitePatterns Eukaryotic initiation factor 4E signature. 111 134 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Sebi889g00020 238 FunFam Eukaryotic translation initiation factor 4E 47 230 - -
Sebi889g00020 238 Pfam Eukaryotic initiation factor 4E 56 207 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi889g00020 Sebi-Chr889 265375 266998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi889g00020 1 225 Eukaryotic Initiation Factors Gene Family AT4G18040 70.870 4.55e-114 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi889g00020 K03259 - gmx:100793288 418.313