Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi889g00016 ATGGCTTCCCGTTATGATTTAATCTGTAATGTGAATGGAGGCTCTGAGCATAAGATTTGGAGAATTAAAGTCAGAGTCATTAGGCTATGGAGGTCTTCATATTTTAAGGATAACAATAATAAACCAATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCACGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAGCGAAGGTAATGTGTACATGCTAGAAAACCTCAACGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGATGTACTAGGTGTTGTTACTGGGAAAGGTAATCTGATTGAGTTCAAGAAAGAGGGAAAGCCATGCAACTATGTTGTCATAGAGTTGGAAAATATTGAGTAA 525 0.379 MASRYDLICNVNGGSEHKIWRIKVRVIRLWRSSYFKDNNNKPMIELVVLDEQGGRIQCTVKSIHVYLFENSISEGNVYMLENLNVALNSGKYKPTMHEFRMFFKRETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVDVLGVVTGKGNLIEFKKEGKPCNYVVIELENIE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi889g00016 174 Gene3D - 116 174 IPR012340 -
Sebi889g00016 174 CDD RPA1_DBD_A_like 21 109 - -
Sebi889g00016 174 SUPERFAMILY Nucleic acid-binding proteins 16 115 IPR012340 -
Sebi889g00016 174 Gene3D - 8 115 IPR012340 -
Sebi889g00016 174 Pfam Domain of unknown function DUF223 45 136 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi889g00016 Sebi-Chr889 158015 158731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi889g00016 20 148 Core DNA Replication Machinery Family AT2G06510 29.851 1.44e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi889g00016 - - aip:107647757 202.986