Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi887g00009 ATGGCTACTGAAACCCTAGAAGATAACAACCCTCCAATTCAAGACAAAGATGACGACCAGCCCAAACCCCAATCAGACGAAAAGGAAGCTGCTGAGGAATCCAAAGAAGAAGTAAACGAAGAAGCAGCAGAAGAGGATACGAAAGAGGCTTCCGCAGAAGTTGACAAATCCGAAGAGAAGAATGAGAAAGACGAAGACGAGAAAGACGAAGAGAGCAATCAGGAAGAAGAAAAAGTAGATGAGAAGAAAGAGACCGAGGAGAAGGATGAGGATGATGAAGACGAAGATGAGAATGAAAATGATGAGGAGGACGAAGCTGAAACTGGTGAGAAGACAAAGGCTAAGAGGGGTCCCAAGAAGGGGAAGAAAGAAAGAGCTAGTAAGAAAGAGGCATCCTCAGAGAAGAAGGATCCTGCTACACCTGCAAGTGAGAGGCCAACAAGGGAGAGAAAAACAGTGGAGCGCTACTCTGTACCTTCACCTGCCAAGTCTGGAAGGTCCTCCACCAGTAAAGGTTTGATAATTGAAAAGGGACGTGGTACCCAGCTTAAGGATATCCCAAACGTGGCTTTCAAATTGTCAAAGAGAAAACCTGATGACAACCTGCACATGCTTCATAATATACTGTTTGGGAAGAAAGCAAAGGCACACAATTTAAAGAGAAATATAGGCCAGTTTTCTGGTTATGTGTGGGTTGAAAATGAGGAAAAGCAGAGGACCAAGGTAAAGGAGAGGATTGACAAATGTGTGAAAGAAAAATTGGTGGACTTCTGTGATGTTCTCAATATTCAAATAAACAAAGCCAATGTGAAGAAGAAAGGTAAAAAGCGAACCAGAAAGGCAACCCCTAGCAAATCACCTGGGGAAGCATCTACTGAAACACCTGCCAAGAAGCAAAAGAAATCTTCTCAATCTGGGAAGAAGAGAAAACAGTCTTCTGATGTTGATGAGGATGATAAGGCTGAACTTTCAGATGCAAAAGATGAATCTCAGGAAGATGAAGATGTTGCAGTTCCAAATAATGAAAGTGATGATGAGGAAAGTAAATCAGAGGAAGAGGAAGATAAATCAAAAGCTCACAGGCGTACTTCCAAAAAGATTGGGAAGGAAGGTTCAGTTGCTAAAACTGGAGATAAAACCACAGCTGTCAAGAAAAGATCTGAGAAAGCTGCCAAAAGCATTGAAAAAACCCCAAAAAAATCAACTTCAAAAAAGACTGTTACTGAGCATGATAGTGCTTCTGCCTCCCTTTCCAAGTCAAAGCAACCTGCATCCAAGAAACAAAAAACTGTGAAGGAAAAGGAGGACATTAAGGGGAAGGCTGCAAGCAAAAAACAAACAGACAAGTCATCAAAGGCTTCAGTTAAGGATCAAGGAAAAGGTAAAAGTAGTAAGAAGGCCAAGGCAGAACCTAGTAGGGAAGACATGCATGCAGTAGTTGTTGATATTCTGAAGGAAGTAGATTTCAATACTGTTCTTAATCACGTGATGGCAAAAAATGAACTTCATGTAAAGCAAGGAGAACCAACTCGAGTTCAGCCTGCAGAGGAAACAGAAAAAGGGCTTTACTTTCTTTCAAACCTTGACCAGAACATTGCAGTTCCAGTTCGCACGGTTTATTGCTTCAAATCAGCTTCTAGAGGAAATGAGGATGCTGCACAAGTTATTAAGGACTCCTTGTCAAAGATTCTTGTTCCTTATTATCCTATGGCAGGAAAGTTGATGATTGGTACAGAAGGGAAGTTGATAGTGGATAACACAGGGGAGGGTGCTGTATTTGTTGAGGCTGAAGCAGATTGCAACATAGAAGACATTGGGGACTTAACAAAGCCTGACCCTGATGCTCTTGGGAAACTGGTTTATGACACCCCTGGTGCTCAGAACATACTTGAGATGCCTCTTATGGCAGTTCAGGTGACAAAATTCAAATGTGGGGGATTCACTTTGGGACTAAACATGATTCATTGCATGAAAGATGGACTATGTGCCATGGAGTTTGTGAATGCATGGAGTGAGACAGCTAGAGGTTTGGACTTAAAGATTCAACCCTTTCTTGATCGAACCATAATCAAAGCACGTAACCCTCCTAAAATAGAGTTCCAACACCATGAATTTGATGAAATTGAAGATATATCAAATACTAAAAAACTTTATGAAGAAGAAAATATGCTCTACAGATCCTTCAGTTTTGATTATAAGAAGCTTGAATTGCTTAAGAAAAAGGCCACTGAAGATGGGGTTGATGGAAGGTCAAGATTTGTGCCCCCAATACCAGAAGGATACTTTGGCAATGCTATAGTGTTGACAAATTCCCTGTGTAAGGCAGGTGAACTATTGAATAATCCTCTGTCATTTACAGTGGGATTGATTCGCAAGGCAATTGACATGGTCACAGATAGTTATATGAGATCTGCTATTGACTATTTTGAAGTCAAAAGAGCCAGGCCTTCCTTAACAGCCACCCTATTGATCACAACTTGGACTAGGCTATCTTTCCACACTACAGACTTTGGTTGGGGAGAACCTTTATGTTCTGGTCCTGTGACCTTGCCAGAGAGAGAAGTTATTTTGTTCTTATCACACGGTCAAGAAAGGAAAAGCATAAATGTGCTCCTAGGTTTACCTGCTTCTGCCATGGAAATTTTGAAGCACTGA 2655 0.4132 MATETLEDNNPPIQDKDDDQPKPQSDEKEAAEESKEEVNEEAAEEDTKEASAEVDKSEEKNEKDEDEKDEESNQEEEKVDEKKETEEKDEDDEDEDENENDEEDEAETGEKTKAKRGPKKGKKERASKKEASSEKKDPATPASERPTRERKTVERYSVPSPAKSGRSSTSKGLIIEKGRGTQLKDIPNVAFKLSKRKPDDNLHMLHNILFGKKAKAHNLKRNIGQFSGYVWVENEEKQRTKVKERIDKCVKEKLVDFCDVLNIQINKANVKKKGKKRTRKATPSKSPGEASTETPAKKQKKSSQSGKKRKQSSDVDEDDKAELSDAKDESQEDEDVAVPNNESDDEESKSEEEEDKSKAHRRTSKKIGKEGSVAKTGDKTTAVKKRSEKAAKSIEKTPKKSTSKKTVTEHDSASASLSKSKQPASKKQKTVKEKEDIKGKAASKKQTDKSSKASVKDQGKGKSSKKAKAEPSREDMHAVVVDILKEVDFNTVLNHVMAKNELHVKQGEPTRVQPAEETEKGLYFLSNLDQNIAVPVRTVYCFKSASRGNEDAAQVIKDSLSKILVPYYPMAGKLMIGTEGKLIVDNTGEGAVFVEAEADCNIEDIGDLTKPDPDALGKLVYDTPGAQNILEMPLMAVQVTKFKCGGFTLGLNMIHCMKDGLCAMEFVNAWSETARGLDLKIQPFLDRTIIKARNPPKIEFQHHEFDEIEDISNTKKLYEEENMLYRSFSFDYKKLELLKKKATEDGVDGRSRFVPPIPEGYFGNAIVLTNSLCKAGELLNNPLSFTVGLIRKAIDMVTDSYMRSAIDYFEVKRARPSLTATLLITTWTRLSFHTTDFGWGEPLCSGPVTLPEREVILFLSHGQERKSINVLLGLPASAMEILKH 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi887g00009 884 Gene3D - 498 706 IPR023213 -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 10 32 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 318 351 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 284 299 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 1 177 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 49 63 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 124 156 - -
Sebi887g00009 884 Gene3D - 707 884 IPR023213 -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 408 424 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 161 175 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 33 48 - -
Sebi887g00009 884 PANTHER DEK PROTEIN 272 492 IPR044198 GO:0003677|GO:0006325
Sebi887g00009 884 Pfam Transferase family 747 884 - -
Sebi887g00009 884 Pfam Transferase family 503 744 - -
Sebi887g00009 884 Coils Coil 28 88 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 352 407 - -
Sebi887g00009 884 Coils Coil 232 252 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 426 475 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 270 475 - -
Sebi887g00009 884 FunFam Spermidine hydroxycinnamoyl transferase 502 705 - -
Sebi887g00009 884 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi887g00009 Sebi-Chr887 262832 277578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi887g00009 510 882 Monolignol Biosynthesis Gene Families AT5G48930 34.038 6.04e-68 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi887g00009 K15400 - gmx:100794490 670.618