Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi87g00067 ATGACATCCTTTCCAGTTGATGTAGAAGACACGCATATGCCACAATCATCTCCTTACTCTTCTTTGACACCAGATTTTGGTTTGATCAATAATGATGAACTTGGGCTTCATGGCACGGAGGATGTTCCTATGCCACAATCATCTGAGATAAATGAATGGGTTCCAAATTGTGATGAAAAAGTAAAGCCTAAGTTAGGGAAGATATTTGATACATTAGAAGATGGTGAAGAGTTTTACAAAAGATATGCACACAGTGTTGGATTTAGCGTGCATTGCTCATCAGAAAGTAAAAACAAAGATGGAGTAAAGCGGTGGAAGTATTTTGTTTGCTCAAAAGAAGGTTACAAACCAAATAAAGCAGAAAATGTGGAACAAAGCAAATCAACAGCTAAGGCTAGAAGAAGGAGTCTTACAAGAGAATGA 423 0.3735 MTSFPVDVEDTHMPQSSPYSSLTPDFGLINNDELGLHGTEDVPMPQSSEINEWVPNCDEKVKPKLGKIFDTLEDGEEFYKRYAHSVGFSVHCSSESKNKDGVKRWKYFVCSKEGYKPNKAENVEQSKSTAKARRRSLTRE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi87g00067 140 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 51 139 - -
Sebi87g00067 140 MobiDBLite consensus disorder prediction 126 140 - -
Sebi87g00067 140 Coils Coil 120 140 - -
Sebi87g00067 140 MobiDBLite consensus disorder prediction 119 140 - -
Sebi87g00067 140 MobiDBLite consensus disorder prediction 1 24 - -
Sebi87g00067 140 Pfam FAR1 DNA-binding domain 77 133 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi87g00067 Sebi-Chr87 1799175 1799827 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi87g00067 FAR1 1.8e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi87g00067 - - ccaj:114916444 150.599