Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi87g00033 ATGGACTCCATCGACGGAGCTCCGCCGCAAGCCACCGTACCTCCGTCGTATCGGCCGTCTCCGTTCCCCGGACGGGAAGACTGCTGGTCTGAGGAGGCTACGTTCACCCTCGTTGATGCCTGGGGAGAACGCTACATCGAGCTCAACCGCGGCAACCTCCGCCAGAAGCACTGGCAGGAGGTCGCCGACGCCGTCAACGACCGCCACGGCCACGACAGGAAGGCTCGCCGCACCGACGTCCAGTGCAAGAACCGAATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAAGCTAGGGTTTCTGAATCCGGCGGTTACACCGGCACCTGGCCGTTCTTTCGCCGCCTTGATTTCCTCATCGGAGACACTTTTCCGGCGAAGAGGCCGTCGCCGCCGGACGTCAGCAATGAGCGCCGGAACGTCTCTCCCATTAAGTCCCCGGCCTGGGCGCTTGTGCCGGGAGGTTGCAGAAGCCTTAGAAAGGTTTGGAGAGATATACGAGAGAGTGGAGACAGCGAAGCAGAGGCAAATGGTGGAGTTGGAGAAACAGAGGATGCAATTTGCTAA 567 0.5979 MDSIDGAPPQATVPPSYRPSPFPGREDCWSEEATFTLVDAWGERYIELNRGNLRQKHWQEVADAVNDRHGHDRKARRTDVQCKNRIDTLKKKYKIEKARVSESGGYTGTWPFFRRLDFLIGDTFPAKRPSPPDVSNERRNVSPIKSPAWALVPGGCRSLRKVWRDIRESGDSEAEANGGVGETEDAIC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi87g00033 188 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 15 159 IPR044823 -
Sebi87g00033 188 MobiDBLite consensus disorder prediction 169 188 - -
Sebi87g00033 188 Gene3D - 29 95 - -
Sebi87g00033 188 MobiDBLite consensus disorder prediction 1 24 - -
Sebi87g00033 188 FunFam trihelix transcription factor ASIL2 29 95 - -
Sebi87g00033 188 Pfam Myb/SANT-like DNA-binding domain 26 118 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi87g00033 Sebi-Chr87 978093 978883 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi87g00033 16 130 Trihelix Transcription Factor Family AT3G14180 60.000 6.18e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi87g00033 Myb_DNA-bind_4 1.5e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi87g00033 - - gmx:100811154 250.366