Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi873g00004 ATGTCTACACACGACGAGTCAGATAACAACGACACGAAGCACCAGGAGAACAACAAGAAGAAACCGTTCGATGCTGTAGAACCGAGTTCGCTTCCCCTGAACGAACTTAGGTCAACCTTCGCTTCCGGCAAAACGCGAAGCTATGAGTGGAGAGTTTCGCAGCTTAACGCACTCATCAAGCTCACCAACGACCACGAGCAACAGATCATCGATGCTCTTCGAAACGACCTCGATAAGCCGCCGCTCGAAACCGTCGCTTACGAGATTGCTATGTTGAAAAATTCATGTAAAGTGGCACTCAAGCAATTGAAACATTGGATGGCTTCAGAGAAGGTCAAAACTTCACTCGCAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGTTAGTCATCTCTGCATGGAACTATCCATTCTTGTTGTCACTTGATCCAGTCATTGGAGCTATTGCTGCTGGTAATGCTGTGGTTCTAAAACCATCAGAAATATCTCCAGCCTCATCATCACTGCTTGCAAAATTGCTAGGGGAATACATGGATAACTCATCTATAAGAGTTGTTGAGGGCGCAGTTGATGAAACATCTGCATTACTGCAACAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAGAGTGGGGCGCATTGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCAGTTATTGTTGATTCAAATATCAACTTACAGGTAGCAATTAGACGGATAATTGCTGGAAAGTGGGGTTGTAACAATGGACAAGCTTGCATCTCCCCAGATTATATTATAACAACCAAGGACTATGCTCCTAAGTTGGTGGATGCACTAAAGATTGGATTGGAGAAATTTTACGGAAAGAACCAATTGGAATCAAAAGATTTGTCCCGGATTGTGAATTCCAACCACTTTGCTCGCTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTAGCCCCACTCTTCTATTGGATGTCCCACGAGATTCTCTTATAATGAGTGAGGAGATATTTGGTCCTTTACTTCCCATCCTCACGGTCGATAAACTGGAAGAAAGCTTTGATGTGATCAATTCTGGACCAAAGCCTCTCGCTGCATATTTATTTACAACCAACAAAAAGCTCAAGGAGCGGTTTGTTATGACTGTTTCTGCTGGCGGTTTGGCTGTCAATGACACTGCTGTACATCTTGCAGTTCATACTTTGCCATTTGGAGGAGTTGGTGAGAGTGGAGTGGGTTCATACCATGGGAAATTCTCATTTGATGCTTTTAGCCACAAAAAAGCAGTTCTTTATCGCGGTTTTATGGGTGATGCATCAATAAGGTACCCACCATACACAAATACAAAGATGAGATTGCTGAAGGCTCTCATTGGTGGTGGCATACTTGGTATAATTCGTGCCCTGTTTGGATTGTCCTAG 1506 0.4336 MSTHDESDNNDTKHQENNKKKPFDAVEPSSLPLNELRSTFASGKTRSYEWRVSQLNALIKLTNDHEQQIIDALRNDLDKPPLETVAYEIAMLKNSCKVALKQLKHWMASEKVKTSLATFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEISPASSSLLAKLLGEYMDNSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVIVDSNINLQVAIRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKIGLEKFYGKNQLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVYGGEKDESKLRISPTLLLDVPRDSLIMSEEIFGPLLPILTVDKLEESFDVINSGPKPLAAYLFTTNKKLKERFVMTVSAGGLAVNDTAVHLAVHTLPFGGVGESGVGSYHGKFSFDAFSHKKAVLYRGFMGDASIRYPPYTNTKMRLLKALIGGGILGIIRALFGLS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi873g00004 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 238 438 IPR016163 GO:0016620
Sebi873g00004 501 SUPERFAMILY ALDH-like 36 474 IPR016161 GO:0016491
Sebi873g00004 501 MobiDBLite consensus disorder prediction 1 29 - -
Sebi873g00004 501 FunFam Aldehyde dehydrogenase 238 438 - -
Sebi873g00004 501 Pfam Aldehyde dehydrogenase family 44 458 IPR015590 GO:0016491
Sebi873g00004 501 FunFam Aldehyde dehydrogenase 37 241 - -
Sebi873g00004 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 456 IPR016162 GO:0016491
Sebi873g00004 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 234 241 IPR029510 GO:0016491
Sebi873g00004 501 PANTHER ALDEHYDE DEHYDROGENASE 33 488 IPR012394 GO:0006081
Sebi873g00004 501 MobiDBLite consensus disorder prediction 1 23 - -
Sebi873g00004 501 PIRSF ALDH 9 491 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi873g00004 Sebi-Chr873 156217 162209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi873g00004 89 501 Aldehyde Dehydrogenase Gene Family AT1G44170 76.271 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi873g00004 K00128 - gmx:100778722 813.913