Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi873g00003 ATGGCGTCTACCATAATCAGCAAGAAGAAGAAGGTGTTCAATTCAGAAGAAGCTTCAGCGATGGTTAGGGATCTGAGAGTGACGTTTGAGTCTGCCAAGACTCGGAGCTACGAATGGAGAGCTTCCCAGTTGAAGGCCCTTATGGAGTTAACTGAAAAGCACGACAAAGAGATCGTTCGAGCTCTTCACTCTGACTTATCCAAATCTGAAACAGAATCCTTCATCCAAGAGGTACAATCTCGCACTCTAAACTAA 255 0.4471 MASTIISKKKKVFNSEEASAMVRDLRVTFESAKTRSYEWRASQLKALMELTEKHDKEIVRALHSDLSKSETESFIQEVQSRTLN 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi873g00003 84 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 79 IPR016162 GO:0016491
Sebi873g00003 84 PANTHER ALDEHYDE DEHYDROGENASE 15 79 IPR012394 GO:0006081
Sebi873g00003 84 SUPERFAMILY ALDH-like 13 79 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi873g00003 Sebi-Chr873 120949 121203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi873g00003 3 80 Aldehyde Dehydrogenase Gene Family AT4G34240 38.462 1.85e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi873g00003 K00128 - pvu:PHAVU_001G0727000 99.7525