Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi873g00001 ATGGAGCTTGTGAATACCCAAAAGCTACAGCTACAACAGCATTTTCATGTATTAGTGGTAGATGATAGTGTCATAGACAGGAAGCTATTGGAGAGACTCTTGAGAGATTCTTCATGCAAAGCTACCTTTGTGGACTCTGGAGATAAGGCTCTGAAATATCTTGGCCTGCTTGATGAACTTGATAATGCTTCCTCAATTTCTTCAGAAACATTGCAACAAGATGGAATCAAAGTAAATTTGATCATGACAGATTACTGCATGCCAGGGATGAGTGGCTATGATTTACTCAAAAGAATCAAGGGATCTTCTTGGAAAGATGTACCAGTCGTCATTATGTCATCAGAAAATGTACCATCCAGAATCAGCATGTGCTTAGAAGGAGGGGCAGAGGAGTTTCTATTGAAGCCTCTTCAGTTATCAGATTTGAAGAAGCTTCAACCGTTCTTTCTGAAACCCTTTGATAATTCCAGTAAACAAGAATCTGTTAACAGTTCTATAGCATCTTACAATGACAATGATAATTACAATAGTACTAATGATAGCATTAGTAAAACGAAGGTGATGTCTCCGGAGCATGGTTTTAAATTACAGTTTGCATCTACAATTGCAGCTACAATACTACGGTTTGGAGGTCTCTGTAAATGCAACACAGCTATATTTGCGATTGCATAA 672 0.381 MELVNTQKLQLQQHFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKYLGLLDELDNASSISSETLQQDGIKVNLIMTDYCMPGMSGYDLLKRIKGSSWKDVPVVIMSSENVPSRISMCLEGGAEEFLLKPLQLSDLKKLQPFFLKPFDNSSKQESVNSSIASYNDNDNYNSTNDSISKTKVMSPEHGFKLQFASTIAATILRFGGLCKCNTAIFAIA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi873g00001 223 CDD REC_typeA_ARR 17 145 - -
Sebi873g00001 223 SMART REC_2 15 146 IPR001789 GO:0000160
Sebi873g00001 223 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 191 IPR045279 GO:0009736
Sebi873g00001 223 Pfam Response regulator receiver domain 17 144 IPR001789 GO:0000160
Sebi873g00001 223 SUPERFAMILY CheY-like 15 145 IPR011006 -
Sebi873g00001 223 Gene3D - 16 167 - -
Sebi873g00001 223 ProSiteProfiles Response regulatory domain profile. 16 150 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi873g00001 Sebi-Chr873 23343 25248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi873g00001 12 165 Response Regulator Gene Family AT3G57040 56.051 4.20e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi873g00001 Response_reg 2.2e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi873g00001 K14492 - gmx:100790440 308.145