Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi871g00010 ATGGCTTCTTCAGCAGTGGAGACCTGCAAATTGGAGGATATGCAGGTGGACATTGAGAAGAACGTAAGGTCTCAGTGGGTGCTTAACGCACCCGAGCCCCCAAGTCCCTGGGAAGTGGTTCTAGATTCTGTGAAGAAAGCCTTCTCGCAGTGTCGAGAAAAGTTTTCCTCTCTCAGAGATCAACCCTGCACCACACTTGTGCTTTCCATTCTGCAGGGGATTTTTCCCATTCTTTCATGGGGTAGAAACTACACTGCAGCCAAATTCAGGAAAGACTTTCTTGCAGGCCTCACTATTGCAAGTCTCTGTATTCCCCAGACTTCCTTTGGACTCTTCAGGCTGGGGTTCCTTGTGGATTTTCTATCGCATGCTGCAATAGTTGGATTTGTAGGAGGAGCAGCGATAGTGATTGGACTTCAACAGTTGAAGGGACTGTTAGGGATCACTCATTTTACGACCAAAACGGACATAATCTCTGTCATCAAAGCTGTCTGGGTAGCAATTCATAATCCTTGGAACCCTCGTAATTTTATCCTCGGATGCTCATTCTTGGTCTTCATCCTAGCCTCTAGGTTTCTGGGTAAAAAGAAGAAGAAGCTGTTCTGGTTGGCATCAATCTCTCCTCTTGTATCTGTTATACTATCAACTCTCTTTGTTTTTCTGACACGAGCTGATAAAAATGGAGTTAAAATTGTGAAACACGTCAAAGGGGGACTCAATCCAATCTCCATCCATCAGTTAGATTTCAACAATCCCTATGTTGGAGAAGTCGCCAAAATTGGATTGGTCATTGCTGTTGTTGCCCTTACTGAATCTGTTGCTGTTGGACGATCTTTTGCATCCATCAAAGGATATCAACTTGATGGAAACAAGGAGATGATGTCAATAGGCTTCACAAATATTATAGGATCTCTCACCTCCTGCTATGTTGCAACTGGTTCATTCTCCCGGACTGCAGTGAATTATGCGGCTGGGTGTGAAAGTTTAATATCAAACATTGTGATGGCTGTGACGGTTTTGATATCACTGTTGTTTTTGACAAAGCTATTGTATTATACCCCAACTGCAATTCTCGCTTCAGTGATCCTCTCTGCACTCCCAGGACTCATAGACTTCCCTGAAGCTTTCAAAATTTGGAAGGTTGATAAGCTTGACTTTCTTGCTACCGCTGGAGCCTTCTTTGGGGTACTCTTTGCATCTGTCGAGATTGGTCTTCTAGTGGCGGTGGTAATATCATTTTCAAAGATCATTCTCATCTCAATTCGACCTGGCACAGAAACTCTTGGAAAACTTCCTGGAACTGATTTGTTCTGTGATGTCTATCAGTATCCTATGGCTGTTAAGATTCCCGGGGTTATGATAATACGTCTCAAGTCTGCGTTGCTTTGCTTTGCAAATGCCAATTTCGTTAGAGAAAGGATCATGAAATGGGTCACTCAGGAAGAATCCGAAGATGACAAGGGAAATTCAAGAAGCACCACTCAACTCGTAATTCTTGACACCTCGAATTTGGTGAACATTGACACCTCCGGGATTGCTTCTCTAGAGGAACTGCAAAAGAGTTTATCTTCACATGGGAAGCAGTTAGCCATTGTCAACCCTAGGTGGCAAGTGATTCACAAGCTAAAGGTGTCCAACTTTGTCAACAAAATAGGTGGTAGAGTCTTTCTTACTGTTGAAGAAGCTGTTGGTTGCAAGAGTGAGTTCTAA 1710 0.4339 MASSAVETCKLEDMQVDIEKNVRSQWVLNAPEPPSPWEVVLDSVKKAFSQCREKFSSLRDQPCTTLVLSILQGIFPILSWGRNYTAAKFRKDFLAGLTIASLCIPQTSFGLFRLGFLVDFLSHAAIVGFVGGAAIVIGLQQLKGLLGITHFTTKTDIISVIKAVWVAIHNPWNPRNFILGCSFLVFILASRFLGKKKKKLFWLASISPLVSVILSTLFVFLTRADKNGVKIVKHVKGGLNPISIHQLDFNNPYVGEVAKIGLVIAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAVTVLISLLFLTKLLYYTPTAILASVILSALPGLIDFPEAFKIWKVDKLDFLATAGAFFGVLFASVEIGLLVAVVISFSKIILISIRPGTETLGKLPGTDLFCDVYQYPMAVKIPGVMIIRLKSALLCFANANFVRERIMKWVTQEESEDDKGNSRSTTQLVILDTSNLVNIDTSGIASLEELQKSLSSHGKQLAIVNPRWQVIHKLKVSNFVNKIGGRVFLTVEEAVGCKSEF 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi871g00010 569 PANTHER SULFATE TRANSPORTER 106 564 IPR001902 GO:0016020|GO:0055085
Sebi871g00010 569 Pfam Sulfate permease family 106 389 IPR011547 GO:0016020
Sebi871g00010 569 SUPERFAMILY SpoIIaa-like 447 563 IPR036513 -
Sebi871g00010 569 Gene3D STAS domain 422 567 IPR036513 -
Sebi871g00010 569 FunFam Sulfate transporter 31 422 568 - -
Sebi871g00010 569 NCBIfam sulfate permease 106 559 IPR001902 GO:0016020|GO:0055085
Sebi871g00010 569 CDD STAS_SulP_like_sulfate_transporter 443 557 - -
Sebi871g00010 569 Pfam STAS domain 443 562 IPR002645 -
Sebi871g00010 569 ProSiteProfiles STAS domain profile. 462 566 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi871g00010 Sebi-Chr871 228527 235801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi871g00010 106 563 Inorganic Solute Cotransporters AT5G10180 70.153 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi871g00010 K17469 - gmx:100781327 810.061