Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi86g00085 ATGGCAGAAGAGGATGCAAAGCCTCTCAACTATATTCCAGAGGTTATATTGAAGAAGAGGAAAAGCAGTGAAGCATTGGCCTTGAGAAAAAAGGCACAATTCCAGCAGAAAAATTTCCAAACCAGGAAAACCAAGGACTTCATCAAAAAGCCTGAGGATTTCATTTTTGAATATCGGAACAGGGAGCTGGACCTTATTAGAATGAAACGAAGGGTAAAGAGGAAACTACCAGAACTATTGACCCCAAACACCAAGCCCATGATAATCATTCGGATACAGGGGAAAAAAGACATGCATCCTAAAACCAGAAAGGTCTTATACAGCTTGGGGTTAAGAAGAATATTCAGTGCTGTCTTTGTGAAGCCAAGTGAGGAAGTAATGGCCAAGCTGCAGAGAGTTGAACCATATGTTACCTATGGGAAGGTGGGTGGGTTATATAATGTCAAAGATGATTCTCTTATGTTCTCCAGCCACTTCATTTATCATAGCAGTGTAACTGTCTCTCTCATCAAAATTCTAATTGGAACTTTTGTCCAGAATGTCAACTTCAAAAGTTCTGTGTGGAAGTTTGAGGTCTTGAGATATCCAAATCTTAAAAGCATAAAGGAGCTAATTTACAAGAAGGGACATGCGAAAATAGATAAGCGAAAAGTTCCTTTGACGGATAATAACATTATTGAGCAGGAATTAGGAAAGTTTGGGACTGTATGCATAGAAGACATGGTACATCAAATTGAGAATGTCGGTCCACACTTTAAGGAAGTTGTTAGATTTTTGTGGCCCTTTGAACTCAACAAGCCAGCAGAAGGATTGAAAGGATCAAAATCCCTGTACGAGGATGGGGGAGACACAGGGAATCGTGAGGAACTCATCAACGAACTAATCAACAAAATGAATTAA 900 0.3956 MAEEDAKPLNYIPEVILKKRKSSEALALRKKAQFQQKNFQTRKTKDFIKKPEDFIFEYRNRELDLIRMKRRVKRKLPELLTPNTKPMIIIRIQGKKDMHPKTRKVLYSLGLRRIFSAVFVKPSEEVMAKLQRVEPYVTYGKVGGLYNVKDDSLMFSSHFIYHSSVTVSLIKILIGTFVQNVNFKSSVWKFEVLRYPNLKSIKELIYKKGHAKIDKRKVPLTDNNIIEQELGKFGTVCIEDMVHQIENVGPHFKEVVRFLWPFELNKPAEGLKGSKSLYEDGGDTGNREELINELINKMN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi86g00085 299 CDD Ribosomal_L7_archeal_euk 89 299 IPR035808 -
Sebi86g00085 299 PANTHER 60S RIBOSOMAL PROTEIN L7 187 299 IPR039699 -
Sebi86g00085 299 Pfam Ribosomal protein L30p/L7e 88 137 IPR016082 -
Sebi86g00085 299 Gene3D - 87 299 IPR036919 -
Sebi86g00085 299 SUPERFAMILY Ribosomal protein L30p/L7e 88 143 IPR036919 -
Sebi86g00085 299 SUPERFAMILY Ribosomal protein L30p/L7e 193 299 IPR036919 -
Sebi86g00085 299 Pfam Ribosomal L30 N-terminal domain 12 75 IPR012988 -
Sebi86g00085 299 FunFam 60S ribosomal protein L7 87 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi86g00085 Sebi-Chr86 1590031 1591726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi86g00085 1 299 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 42.244 1.51e-67 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi86g00085 K02937 - qsa:O6P43_017954 328.176