Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi86g00072 ATGGGGATAATTATATTTGCCATGAAACCTTGTATTTTCTTCGCCGCTGAGTTCAATTCAACAATGGCCTATTCGGGTTCAATACGATTGTTTCACGACATCAGGCTATACACTAATAATGGAGGCTGTAGTTTTTGTCATAAGTCTATGCGTGGTGATTTTGTCATCATCAACCTTTCACCACATGGTTTGAGGCAGGGTTCTTCAGCACTCCTTCTTTCCAGATTACATGGCCCACTTAAGCCTCTACCTTCTAGATGTAATGTTTTGTTTTGCCGGTCTGCCCTAACACCAGCTGGAGGGTGTGAGGCCCCACTTGTGAAAGTGGCTACTGTTTCTTTGTCAAGGTCATATAATGCTATATCAGTAAGACCAATTGTGCTTCGATTGATCCCTGCACTTGGTATCATTGGCTTTGCTGTCTTTGGTCTTGAGCCGCTTCTTGCGCTTGAGAGTGATAGAAGTTGGAAGAAAAGTAATTCACGTTATATTATGACATCTTATTTTCAACCCTTGCTGCTCTGGACTGGGATAATGCTCATATGCAGAGATTTAGATCCACTAGTCCTACAATCAGAAACCAGTCAGACTATGAAGCAACGGCTGCTGAGTTTTGTAAGATCTTTGTCAACCGTGCTTACATTTGCTTACTGTTCTTCAAGCTTAACTCGACAAGCACAAAAATTCTGTATGGAGACAAATGACTCCAGTGATGAAAGAAATATGAGCATTAATCTTATTGGAAAAGCTGTGTACACTGCAATATGGGTTGCTGCTGTATCGTTATTCATGGAGTTGATGGGTTTCTCCACCCAGAAGTTGTTGACTGCTGGTGGTTTGGGCACAGTGTTGCTTTCCCTTGCAGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACACGTCCATTTGTTGTGAATGAGCGGATTCAAACAAAGATCAAAGGATATGAGGTTTCTGGTAAAGTTGAGCATGTAGGCTGGTGGTCACCAACAATAGTTAGAGGTGCTGATTGTGAAGCAGTTCATATTCCTAATCACAAGTTGAGTGTAAATGTTGTGAAGAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCACCTTGCTATTAGTCACTTGGATATTAGCAAGGTTAATAGTATTATAGCTGATATGCGCAAGGTTTTGGCCAAAAATCCTCAAGTAGAGCAGAAAAAGTTGCACAGAAGGGTTTTTCTGGAGGATATTAATCCACAAAATCAGGCTCTTATGATATTAGTGTCTTGCTTTGTTAAAACTTCACATTCGGAAGAGTACCTCCGTGTTAAGGAGGCAATTCTCTTGGATCTTCTTAGAATCATCAGTCATCATGGAGCTCGGCTAGCCATGCCTATCCGCACAGTTCAGAAGATGTGCAGTGATGCTGATTTAGAAAACGATCCATTTGATGACACCATTTCCACACGTTCCAGAGCAAAGACAAACCGTCCATTCCCGCGTGTAGATCCACCTTATAAAGTCCAGAAGACTTCCAAATCCCCACAATCCAAAAAGGAAAGTGCGGGAAGTGCAGAAAAGGGAACAACACAAAAAAATTTGTTAACATCCAATGAGTGTTCACCATCAAAGCAAGATGAAAAGAAATCTGATGTGTCCTTATCATCAGTTAGTCCTTACTTGGAAGAGAATATTGTACTTGATGCTGCCCTGGTGGGCTCAAAGCGAACTCCTACAGTTGATGAAGAAATGATTCCATCTATCCCTGCAGAATCACAAGAATTTACTGTCCAACAGATTGGGAATGAATCTTCTTTTAGCAAGGATAAGAACGGTACATCTCCATTTCCTTATCAGTAA 1851 0.41 MGIIIFAMKPCIFFAAEFNSTMAYSGSIRLFHDIRLYTNNGGCSFCHKSMRGDFVIINLSPHGLRQGSSALLLSRLHGPLKPLPSRCNVLFCRSALTPAGGCEAPLVKVATVSLSRSYNAISVRPIVLRLIPALGIIGFAVFGLEPLLALESDRSWKKSNSRYIMTSYFQPLLLWTGIMLICRDLDPLVLQSETSQTMKQRLLSFVRSLSTVLTFAYCSSSLTRQAQKFCMETNDSSDERNMSINLIGKAVYTAIWVAAVSLFMELMGFSTQKLLTAGGLGTVLLSLAGREIFTNFLSSVMIHATRPFVVNERIQTKIKGYEVSGKVEHVGWWSPTIVRGADCEAVHIPNHKLSVNVVKNLSKKSHWRIKTHLAISHLDISKVNSIIADMRKVLAKNPQVEQKKLHRRVFLEDINPQNQALMILVSCFVKTSHSEEYLRVKEAILLDLLRIISHHGARLAMPIRTVQKMCSDADLENDPFDDTISTRSRAKTNRPFPRVDPPYKVQKTSKSPQSKKESAGSAEKGTTQKNLLTSNECSPSKQDEKKSDVSLSSVSPYLEENIVLDAALVGSKRTPTVDEEMIPSIPAESQEFTVQQIGNESSFSKDKNGTSPFPYQ 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi86g00072 616 Gene3D - 205 306 - -
Sebi86g00072 616 MobiDBLite consensus disorder prediction 506 538 - -
Sebi86g00072 616 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 22 545 IPR045042 -
Sebi86g00072 616 SUPERFAMILY Sm-like ribonucleoproteins 292 362 IPR010920 -
Sebi86g00072 616 Pfam Mechanosensitive ion channel 249 458 IPR006685 GO:0016020|GO:0055085
Sebi86g00072 616 Gene3D - 307 360 IPR023408 -
Sebi86g00072 616 MobiDBLite consensus disorder prediction 477 552 - -
Sebi86g00072 616 MobiDBLite consensus disorder prediction 569 616 - -
Sebi86g00072 616 MobiDBLite consensus disorder prediction 588 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi86g00072 Sebi-Chr86 1310740 1319441 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi86g00072 22 607 Mechanosensitive Ion Channel Family AT1G58200 51.907 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi86g00072 K22047 - gmx:100797302 887.1