Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi86g00026 ATGAGGAAGAAAAGGAAAGGAAGTGAGACTGATGCATCTCCGGATCTGCGTGATATTTTAGCCTCCAACCATGGCTCTGCTGTGTCATCGAATCTGAAATCACATTACTCGCTAGAAGATTGTTCTAGGCTGAAGAAGAGGTGTAAAGAAGATGCTGACACTGAGCCAGCTGCTGCTTCTTATAAAAGTAGGCTTGCTGGCATTGCCACTGCTCCACCCTGTGGGACATCATCTTTGATCACGCCAGGAAGAGGTCTCAAGAGGAAGATAGGTTGCATTGATGTTGCTACCCAGATGGGCAGAAAAAAGAAGATTGATGATGATTATGTTTCAGGTGAAACAATTGGGCAAGGGAAATTTGGATCAGTTTGGTTGTGTCGGTCCAGGGTTAGTGGAGCAGAATATGCCTGTAAGACTCTGAGGAAGGGGGAGGAGACGGTTCATCGAGAGGTTGAGATAATGCAACACTTGTCTGGACATTCTGGGGTTGTGACACTACAAGCAGTTTATGAAGAAGCTGACTGCTTTCATCTTGTGATGGAATTGTGCTCTGGAGGACGACTGATTGATCAAATGGTTAAGGATGGCCCATATTCAGAACAACGGGCTGCGAATATACTAAAGGAAGTGATGTTAGTCATCAAGTATTGTCATGACATGGGTGTTGTGCACAGAGATATCAAACCTGAGAATATTCTGCTCACGGCATCAGGAAAATTAAAGCTTGCTGATTTTGGCCTGGCCATGAGAATTTCAGAAGGATACTGTGAGAAGGTTGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGCAGTCTTCCTTTTCAAGGAGATTCATTGGAAGCTGTTTTTGAGGCTATCAAGACTGTCAAATTAGATTCCAAGCAGGGATGGCATCCATGGATACTGTTCTACACTGCGCATACATTGACAATGCTTCCCATCAAAACAAAATTGAAGCACCAAATTAGTGCAGCATGCGGACAGCGTGTCACCGCACCTGAACCTAGGTTAGGAGGAGACAAGATAGATAATGGCTCACTTAGCGAGCTTTCTTCCTCTGAAAGTTGCAATTCAGATGATCAGGATGAATGTGTGCTGATTGATGCACTTGCCACTGCAATTTCACATGTGAGGATTTCTGAACCGAAGAGGAGCAGATTGTGTAGTCCCACCGGCCCAATAGTTCAGCAAGATTCATCTAACCTGAAGGCTAACAAACTCTGTAAAGCATTTTGA 1248 0.4463 MRKKRKGSETDASPDLRDILASNHGSAVSSNLKSHYSLEDCSRLKKRCKEDADTEPAAASYKSRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIDDDYVSGETIGQGKFGSVWLCRSRVSGAEYACKTLRKGEETVHREVEIMQHLSGHSGVVTLQAVYEEADCFHLVMELCSGGRLIDQMVKDGPYSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGKLKLADFGLAMRISEGYCEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKTVKLDSKQGWHPWILFYTAHTLTMLPIKTKLKHQISAACGQRVTAPEPRLGGDKIDNGSLSELSSSESCNSDDQDECVLIDALATAISHVRISEPKRSRLCSPTGPIVQQDSSNLKANKLCKAF 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi86g00026 415 ProSiteProfiles Protein kinase domain profile. 109 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi86g00026 415 MobiDBLite consensus disorder prediction 1 31 - -
Sebi86g00026 415 MobiDBLite consensus disorder prediction 338 363 - -
Sebi86g00026 415 SUPERFAMILY Protein kinase-like (PK-like) 106 293 IPR011009 -
Sebi86g00026 415 SMART serkin_6 109 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi86g00026 415 Gene3D Transferase(Phosphotransferase) domain 1 100 316 - -
Sebi86g00026 415 PANTHER SERINE/THREONINE-PROTEIN KINASE 96 301 - -
Sebi86g00026 415 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Sebi86g00026 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Sebi86g00026 415 MobiDBLite consensus disorder prediction 349 363 - -
Sebi86g00026 415 Pfam Protein kinase domain 109 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi86g00026 Sebi-Chr86 552443 554982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi86g00026 105 361 EF-hand Containing Proteins AT1G61950 36.395 5.56e-51 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi86g00026 Pkinase 7.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi86g00026 - - gmx:100812729 685.641