Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi86g00018 ATGTCTGAGTCCCTGGCATGGGAGAAGTGGTCTAGTTTCTCTCACAACCGCTATGTTGAAGAGGCAGAGAGGTATTCAAGACCTGGTTCAGTTGCACAGAAGAAGGCTTTCTTTGAAGCCCACTACAAGAAACTTGCTGCTCAAAAGGCAGCTGCTTTGCTTGAACAAGCAAACAATGCTGCACAAAACAATGCCACTGGACAAGAAGATGGGGAAGTAATTGATAATGACACCCATGATTCACATACTAGTCCAAACCATGAAATGGTTGTCAAGGAAGAAAAAGATGCAAAGGTTTTGAGTCTGACCTCTGAGCCAGATACCATGGTCAGTGCCACTAGTCAGGATTTAGATTCAAATATAGAGGCAAGTATTGTATCTGAAAGTAGCAAGATAGAGGAAGCTGGGCCAGAGATGGGACAAGCAGCTGTTATAGAGAATTCAATGGAGGTTGGATTGCAAAACCAGCTTGAAGATGTTGATGCCCATAAGGAGCAAAATGAAACACCTCCAATTATGACACCACTAGTGAAGCAGGTACCTAACTCTGATCAAGAAGTTTTGGCATCCACGGGCAAGAAGAAACCACCAGTTTCTTCCTTTAAGTTGCTAAAGGCTAATGGAACCTCCAAGATGGATAAGGCATCGATTATTAAGGATGCTATTGAGTACATACAGCACTTGCATGAGCAAGAGAAGATGATCCAAGCTGAGATAATGGAGCTTGAATCTGGGATGCCAAAGAATAATAATCCAAGTTATGACTTTTAG 771 0.4254 MSESLAWEKWSSFSHNRYVEEAERYSRPGSVAQKKAFFEAHYKKLAAQKAAALLEQANNAAQNNATGQEDGEVIDNDTHDSHTSPNHEMVVKEEKDAKVLSLTSEPDTMVSATSQDLDSNIEASIVSESSKIEEAGPEMGQAAVIENSMEVGLQNQLEDVDAHKEQNETPPIMTPLVKQVPNSDQEVLASTGKKKPPVSSFKLLKANGTSKMDKASIIKDAIEYIQHLHEQEKMIQAEIMELESGMPKNNNPSYDF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi86g00018 256 MobiDBLite consensus disorder prediction 72 93 - -
Sebi86g00018 256 Gene3D - 152 251 IPR036638 GO:0046983
Sebi86g00018 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 245 IPR036638 GO:0046983
Sebi86g00018 256 Coils Coil 43 64 - -
Sebi86g00018 256 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 216 IPR044216 -
Sebi86g00018 256 MobiDBLite consensus disorder prediction 60 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi86g00018 Sebi-Chr86 381496 382424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi86g00018 210 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29930 55.319 5.08e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi86g00018 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi86g00018 - - gsj:114398938 257.684