Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi867g00009 ATGGGTCGTGTAGATGGCATTGTTCCCACTTTACATTTCCCTGATTCTTCACCTGTTGTGAATCAAAACATGTTTTCCAATTGGGAAGCTGTATCAGCTGAGAATCTAGAAGATGCCAACAAGATGTTGCTTGAAATTTCCCAACTTTCTACACCATTTGGTACATCAGCACAGCGTGTTGCAGCATATTTCTCAGAAGCCATATCAGCAAGACTAGTTAGTTCATGTTTGGGAATATATGCATCTCTTCCTCACACCCACCAAAGCCATAAGGTAGCATCAGCTTTCCAAGTCTTCAATGGAATCAGCCCTTTTGTAAAGTTCTCACATTTCACAGCAAACCAAGCTATACAAGAAGCTTTTGATAGAGAAGAGAGGGTGCATATCATAGATCTAGACATAATGCAGGGTTTGCAATGGCCTGGTTTATTTCATATCCTTGCTTCAAGACCTGGTGGACCCCCTTATGTGAGACTCACAGGGTTAGGTACTTCCATGGAAGCACTTGAAGCAACTGGTAAACGTTTGTCTGATTTTGCTAGTAAACTTGGACTTCCCTTTGAGTTCTTCCCAGTTGCTGATAAAGTTGGGAACCTTGACCCTGAGAGGCTTAATGTGAGCAAAGCTGAAGCTGTTGCTGTTCATTGGTTGCAACATTCACTCTATGATGTCACTGGATCAGATACAAACACTTTGTGGCTCTTGCAAAGGTTGGCACCTAAAGTGGTGACTGTGGTAGAGCAGGACCTGAGCAACGCTGGTTCTTTCTTAGGAAGGTTTGTGGAAGCCATACACTATTACTCAGCATTATTTGATTCTCTTGGTTCTAGCTATGGAGAGGAAAGTGAAGAGAGACATGTGGTGGAGCAGCAGCTACTATCTAGGGAGATTCGTAATGTGCTAGCAGTTGGGGGCCCATCAAGAACTGGAGAGATCAAGTTCCATAACTGGAGAGAAAAGCTTCAACAGTGTGGGTTTAGAGGTATTTCACTAGCTGGTAATGCTGCCACACAAGCAAGTTTACTCCTTGGCATGTTCCCTTCTGAAGGGTATACCTTAGTGGAGGACAATGGGATCCTTAAACTTGGTTGGAAAGATCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCTCCCTACCATTGTAGCACTGCCATTACTCATCATAACTAA 1170 0.4359 MGRVDGIVPTLHFPDSSPVVNQNMFSNWEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYASLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFDREERVHIIDLDIMQGLQWPGLFHILASRPGGPPYVRLTGLGTSMEALEATGKRLSDFASKLGLPFEFFPVADKVGNLDPERLNVSKAEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEIKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPYHCSTAITHHN 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi867g00009 389 ProSiteProfiles GRAS family profile. 11 376 IPR005202 -
Sebi867g00009 389 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 371 IPR005202 -
Sebi867g00009 389 Pfam GRAS domain family 23 376 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi867g00009 Sebi-Chr867 154025 156023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi867g00009 29 377 GRAS Transcription Factor Family AT3G54220 86.158 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi867g00009 GRAS 8.7e-121 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi867g00009 - - gmx:100806779 685.256