Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi865g00013 ATGCCCTTTTCTCTTTCTAAACTCTACGGGATTCCTCCTGAGAAACTCAGCTCAGAAGAATCCTCAGAGGAAGGTTCAGGGCTTCTAGAGCCTCCTGATCCTGATGTTGTTGAAATTGATCCCACTTCTCGCTACATTAGGTATAAAGAAGTAATCGGCAAAGGAGCTTTCAAGACAGTTTACAGGGCATTTGATGAAATTAGCGGACTTGAAGTTGCATGGAGCCAAGTTCGGATTGATGAGGTATTACAGTCACCAGGTGACCTAGAGAGGCTGTACTCAGAAGTGCATCTCTTGAAGTCATTGAAGCACAATAACATAGTAAGGTTCTACAATTCCTGGATTGATGACAAGCACAGGACTGTTAACATGATTACTGAGTTGTTCACCTCGGGGAGCCTCAGACAGTATCGTAGGAAACACAAGAAAGTTGACATGAAGGCTGTTAAAGGATGGGCAAGACAGATTTTAGTGGGGTTAAATTTCCTCCACAGTCACAACCCACCTATTATCCATAGGGACTTGAAGTGCGATAATATATTTATAAATGGTCACCAAGGAGAAGTTAAAATTGGAGATCTGGGGTTGGCAACACTCTTGAAGCAGAATAATGCCAAAAGTGTAATTGGTACCCCAGAGTTTATGGCACCTGAACTGTATGATGAAAATTATAATGAATTAGCCGACATATATTCTTTTGGGATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCTTACCGTGAATGTAGAAACTCTGCTCAGATATACAAGAAAGTTTCATCTGGTATAAAGCCAGTTGCTCTTTCTAAAGTCAAAGATCCAGAAACAAAATCATTTATTGAGAAATGTCTTGTCCCAGCATCTCAAAGATTGTCAGCAAAGGAACTTCTGATGGACCCTTTTCTCCAAGTGAATGGTTTAGGAAAGAATCGTCCTCTTCCATTACCAGATATTGTCCTTCCAAAATTTGGAGCCTTTGAAAATCGTTGTCTGATGTCAGAAGGTCCAGCTAGTGCACGTACCGGATCCATTTCAATGGATCTCGGTGATACCAGTGAGCTACCATTGATCACTGTATTTTATAGTTCTGTTGATGATGCATCATCTTCTCCATGTGTTGAGATACGAAGGTTGAAGGCAGGTGACATATTTTTTCTAAAAGGTGAAGAAAATGATGAGAACTCTGTATCGTTAGTTCTCCGGATAGCTGATCAGAGCGGGCGGGCAAGAAATATCCATTTCATGTTCTACCTCGACAGTGATACTGCCATCTCAATTTCAAGTGAAATGGTTGAACAGCTTGAACTTGCCGAGCAGAATATTAAATTCATTGCTGAGTTAATTGATCTGTTAATGATAACTTTGGTTTCTGATTGGAAACCTTGTGTAGCAATTGATCATTTAGTTTCTCCAAATAGTAAAAGGATTCATCTGAGCCAACGAAAAAAAGACTCAGAGATGGCAAAATATAAACAAAGTTCAGAAGATTCTAGCCAAATTGTGGCTGATGATGTAGGTCCCTCAATCTCACCTGGAAGATCAGCGGAAAAAGAAAACCATGATGATGTGACTTTTGACGAGGTTTTATCTCATGCAAGCATTGGTCTTCAAAGGGCAACAAAGACAGATGATTTGTGTTCTGTAATGTCATATGCTTCTGCAGCATCTGACTTCAATGATAAGAATTTATCTGCAGTTTCATTCATGTCTGCTAAATCAGGTTTTACAGACATCAACTTACCTACAGTGAATTGTGCGAGTCAAACCTCGCTTGCATCTGAAATCGGGACATCACCTGATAATAAGAGCAAGCTTCAATATCATCCCATTAGTGCTTCCTCCTCCGCTCCTGAAGATGAGTTGAGAGTAGAGTTAGAGATGATTGAACAGCAATATCAAGAGGCAATTAAAGATTTATCCAAAAGAAGATACCAGGCCATCATAGAGACCAGAAGGAGGCTGTCACAAAAAAATGCAATCATAGAATAA 1992 0.4006 MPFSLSKLYGIPPEKLSSEESSEEGSGLLEPPDPDVVEIDPTSRYIRYKEVIGKGAFKTVYRAFDEISGLEVAWSQVRIDEVLQSPGDLERLYSEVHLLKSLKHNNIVRFYNSWIDDKHRTVNMITELFTSGSLRQYRRKHKKVDMKAVKGWARQILVGLNFLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATLLKQNNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYRECRNSAQIYKKVSSGIKPVALSKVKDPETKSFIEKCLVPASQRLSAKELLMDPFLQVNGLGKNRPLPLPDIVLPKFGAFENRCLMSEGPASARTGSISMDLGDTSELPLITVFYSSVDDASSSPCVEIRRLKAGDIFFLKGEENDENSVSLVLRIADQSGRARNIHFMFYLDSDTAISISSEMVEQLELAEQNIKFIAELIDLLMITLVSDWKPCVAIDHLVSPNSKRIHLSQRKKDSEMAKYKQSSEDSSQIVADDVGPSISPGRSAEKENHDDVTFDEVLSHASIGLQRATKTDDLCSVMSYASAASDFNDKNLSAVSFMSAKSGFTDINLPTVNCASQTSLASEIGTSPDNKSKLQYHPISASSSAPEDELRVELEMIEQQYQEAIKDLSKRRYQAIIETRRRLSQKNAIIE 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi865g00013 663 SUPERFAMILY Protein kinase-like (PK-like) 47 304 IPR011009 -
Sebi865g00013 663 Gene3D Transferase(Phosphotransferase) domain 1 129 307 - -
Sebi865g00013 663 ProSiteProfiles Protein kinase domain profile. 46 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi865g00013 663 Pfam Protein kinase domain 48 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi865g00013 663 Gene3D Phosphorylase Kinase; domain 1 32 127 - -
Sebi865g00013 663 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 32 655 - -
Sebi865g00013 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 170 182 IPR008271 GO:0004672|GO:0006468
Sebi865g00013 663 MobiDBLite consensus disorder prediction 1 34 - -
Sebi865g00013 663 MobiDBLite consensus disorder prediction 595 614 - -
Sebi865g00013 663 Gene3D - 395 496 - -
Sebi865g00013 663 MobiDBLite consensus disorder prediction 595 619 - -
Sebi865g00013 663 FunFam Probable serine/threonine-protein kinase WNK1 31 127 - -
Sebi865g00013 663 Coils Coil 619 643 - -
Sebi865g00013 663 SMART serkin_6 46 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi865g00013 663 CDD STKc_WNK 44 303 - -
Sebi865g00013 663 MobiDBLite consensus disorder prediction 480 522 - -
Sebi865g00013 663 FunFam probable serine/threonine-protein kinase WNK9 129 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi865g00013 Sebi-Chr865 141259 144300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi865g00013 146 508 MAP Kinase Kinase Kinase AT1G49160 64.738 6.57e-173 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi865g00013 Pkinase 6.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi865g00013 K08867 - gmx:121175054 961.829