Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi865g00010 ATGGAATGTGAAATCAAAGACAAATCGGCGAAGATAGTAAGAGTGGGAGTGGGAAAAGACTATTACGTTTTGAAATCCAAAATCGGAGAGGGTTCATACTCCACAGTGTGGAAATCTGAGCAGAGACCAAGTGGTCAAGAGGTGGCGGTCAAACAGGTCTTCCTCTCCAAACTCACCCCTCGCCTCAAGGCTTGCTTGGACTGCGAGACCAATTTCTTGTCTTCTGTTAATCATCCTAATATTATTCGCCTTCTTCACTTCTTCCAGGCTGATGGATGTGTATACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATTTGGCTTCTTATATTCGACGCCATGGGAGAGTTCAACAACAAACGGCCAGAAAATTCATGCAGCAGCTTGGCTCTGGTCTTAAAGTATTACACTCTCACGGCATCATTCACAGAGACTTGAAACCAGAGAACATTTTGCTATCAAGCCGTGGGGCTGATGCCGTGCTAAAGATAGCTGATTTTGGTCTCTCAAGAATTGCTCGCCCGGGTGAGTATGCTGAGACTGTTTGTGGTTCTCCATTATACATGGCTCCAGAAGTTCTTCAGTTCCAGAGATATGATGCCAAGGTTGACATGTGGAGTGTTGGGGCCATTCTTTTTGAGCTTCTAAATGGCTACCCACCTTTTAATGGCAGAAATAATGTTCAGCTGCTGAAAAATATCAGATCCTGTACCTGTCTTCCATTTCCTAAACTGATTATTTCAGGACTGGATCCTGACTGTCTAGATATTTGTTCAAGACTACTATGCTCAAATCCAGTGGAGCGCCTATCTTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAAAATTGATGGAAAGTTGA 864 0.4352 MECEIKDKSAKIVRVGVGKDYYVLKSKIGEGSYSTVWKSEQRPSGQEVAVKQVFLSKLTPRLKACLDCETNFLSSVNHPNIIRLLHFFQADGCVYLVLEFCAGGNLASYIRRHGRVQQQTARKFMQQLGSGLKVLHSHGIIHRDLKPENILLSSRGADAVLKIADFGLSRIARPGEYAETVCGSPLYMAPEVLQFQRYDAKVDMWSVGAILFELLNGYPPFNGRNNVQLLKNIRSCTCLPFPKLIISGLDPDCLDICSRLLCSNPVERLSFDEFYWHSFLQRKLMES 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi865g00010 287 Pfam Protein kinase domain 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi865g00010 287 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 13 282 IPR045269 GO:0004674|GO:0006914
Sebi865g00010 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Sebi865g00010 287 SMART serkin_6 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi865g00010 287 Gene3D Transferase(Phosphotransferase) domain 1 17 287 - -
Sebi865g00010 287 FunFam Maternal embryonic leucine zipper kinase 18 285 - -
Sebi865g00010 287 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Sebi865g00010 287 ProSiteProfiles Protein kinase domain profile. 22 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi865g00010 287 SUPERFAMILY Protein kinase-like (PK-like) 18 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi865g00010 Sebi-Chr865 127802 130183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi865g00010 22 273 CBL-interacting serine-threonine protein kinases AT2G30360 37.984 2.36e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Sebi865g00010 Pkinase 4.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi865g00010 - - lja:Lj1g3v1289070.2 498.049