Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi865g00001 ATGGCTGATGCTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAGGCAGGATTTGCTGGTGATGATGCTCCTAGGGCTGTGTTTCCCAGTATTGTTGGCCGACCTCGTCATACTGGTGTTATGGTTGGGATGGGTCAAAAGGATGCCTATGTGGGTGATGAAGCCCAATCAAAAAGAGGTATTCTTACTCTGAAGTACCCCATTGAGCATGGTATAGTCAGTAACTGGGATGACATGGAAAAGATTTGGCATCACACATTTTACAATGAACTGCGTGTTGCTCCTGAGGAGCACCCAGTGCTTCTAACTGAGGCTCCACTCAACCCAAAGGCCAATAGAGAAAAGATGACCCAAATTATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTCCTCTCTCTTTATGCAAGTGGTCGCACAACAG 454 0.4714 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi865g00001 151 CDD NBD_sugar-kinase_HSP70_actin 10 150 - -
Sebi865g00001 151 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Sebi865g00001 151 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Sebi865g00001 151 Gene3D Actin; Chain A, domain 2 36 73 - -
Sebi865g00001 151 SUPERFAMILY Actin-like ATPase domain 5 148 IPR043129 -
Sebi865g00001 151 PRINTS Actin signature 51 62 IPR004000 -
Sebi865g00001 151 PRINTS Actin signature 117 130 IPR004000 -
Sebi865g00001 151 PRINTS Actin signature 142 151 IPR004000 -
Sebi865g00001 151 PRINTS Actin signature 28 37 IPR004000 -
Sebi865g00001 151 PRINTS Actin signature 63 85 IPR004000 -
Sebi865g00001 151 PANTHER ACTIN 9 151 IPR004000 -
Sebi865g00001 151 FunFam Actin, alpha skeletal muscle 3 150 - -
Sebi865g00001 151 FunFam Actin, alpha skeletal muscle 36 73 - -
Sebi865g00001 151 Gene3D - 4 150 - -
Sebi865g00001 151 Pfam Actin 5 151 IPR004000 -
Sebi865g00001 151 SMART actin_3 7 151 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi865g00001 Sebi-Chr865 59 600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi865g00001 1 151 Cytoskeleton Gene Families AT5G09810 99.338 2.23e-111 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi865g00001 K10355 - oeu:111401141 311.997