LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi865g00001	ATGGCTGATGCTGAGGATATTCAACCCCTTGTTTGCGACAATGGAACTGGAATGGTGAAGGCAGGATTTGCTGGTGATGATGCTCCTAGGGCTGTGTTTCCCAGTATTGTTGGCCGACCTCGTCATACTGGTGTTATGGTTGGGATGGGTCAAAAGGATGCCTATGTGGGTGATGAAGCCCAATCAAAAAGAGGTATTCTTACTCTGAAGTACCCCATTGAGCATGGTATAGTCAGTAACTGGGATGACATGGAAAAGATTTGGCATCACACATTTTACAATGAACTGCGTGTTGCTCCTGAGGAGCACCCAGTGCTTCTAACTGAGGCTCCACTCAACCCAAAGGCCAATAGAGAAAAGATGACCCAAATTATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTCCTCTCTCTTTATGCAAGTGGTCGCACAACAG	454	0.4714	MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTT	151

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi865g00001	151	CDD	NBD_sugar-kinase_HSP70_actin	10	150	-	-
	Sebi865g00001	151	ProSitePatterns	Actins signature 1.	55	65	IPR004001	-
	Sebi865g00001	151	ProSitePatterns	Actins and actin-related proteins signature.	106	118	IPR020902	-
	Sebi865g00001	151	Gene3D	Actin; Chain A, domain 2	36	73	-	-
	Sebi865g00001	151	SUPERFAMILY	Actin-like ATPase domain	5	148	IPR043129	-
	Sebi865g00001	151	PRINTS	Actin signature	51	62	IPR004000	-
	Sebi865g00001	151	PRINTS	Actin signature	117	130	IPR004000	-
	Sebi865g00001	151	PRINTS	Actin signature	142	151	IPR004000	-
	Sebi865g00001	151	PRINTS	Actin signature	28	37	IPR004000	-
	Sebi865g00001	151	PRINTS	Actin signature	63	85	IPR004000	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi865g00001	Sebi-Chr865	59	600	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi865g00001	1	151	Cytoskeleton Gene Families	AT5G09810	99.338	2.23e-111	319

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi865g00001	K10355		-	oeu:111401141	311.997

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