Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi863g00011 ATGTCAATGTTGGATCTCAATGTTGACATTACCCATGCTGGTGCTGACTCAACCTGTGCTCAAAACGGGTTGCTACTGCAAAGTTTTCCACCTGAAATATCAGATTCTAAGACCTCCAACTCCTCAGTTTGGAATCCTGCAGAGGAAGATTCCTCAAACAATTCTTCTCCCTTCATATTTGACATATTGAAGAAAGAAAGAGATGGCTCAGAATTTCATACCACTGAAAGGGTCAAAGAAGAATACATGGCACAAGAGCCAGAGAATGTCACAAGGACCCTTTTCCCTGTAATTGCTGATAAAGGAGGTAGATTGTCTGATTCAAAGTTGGGGTTGTGGGGGAAGACTCAATGGCTGAACTTGTCAATCTCTGAGCCTGATGCACAAAATGGAGTGAGAACCTTGCAGCAGAAGCAACCTCAAGTTAGAAAAAGTAGGAGAGGACCAAGGTCTCGCAGCTCACACTATAGGGGTGTTACCTTCTACCGCAGGACTGGTAGATGGGAGTCACATATATGGGATTGTGGGAAACAGGTCTATTTGGGTGGATTTGACACTGCTCATGCTGCTGCAAGAGCGTATGATAGGGCTGCTATTAAGTTTAGGGGAGTTGATGCTGATATAAACTTTAGTTTGAGTGATTATGAGGAAGATTTGAAGCAGATGAAAGGTTTGAGTAAGGAAGAATTTGTGCTCATGATTCGTCGACAAACCAATGGAATCTTGAGGAGAAGTTCAGCATACAGAGGTGGATTAGCTCTTCACAAATATGGCCAAGGAGCAAGAATGGGACCATTTGTTAGCAAAACATTTTGTCACATGCCACCACTCATCAAGTTTGATGATGAAGTGGAGAAGCCCTGTACCTATAAGGGAGAGATAATTACAAATCCTAGCAAAACAGGAACTTTTCATAATCTTGATTTGAGCCTTGGGATTTCATCATCTTCTAAACAATTGAATGGTAGCGATTCTGGAAGTGGATTTTTCTTTGGATATACGGATTGTAAGATACCCAAAGAAAGAGGAACAATGGAGAAGGCCTTGGAAAACAGAATTAAAGATGTTCCTTTGCAACAATTTTCCAACTTGGCTTGGCAACTTTGCAGCAATGGCAGCATTGTATTAGGGCCGTTGCAATCGAGTGCAGCATCATCAGGATTCGTTTCTTCTAGTAGCTTTTCCATCACCCATCATGCTTCCAATCAGCACGCACAATAA 1221 0.421 MSMLDLNVDITHAGADSTCAQNGLLLQSFPPEISDSKTSNSSVWNPAEEDSSNNSSPFIFDILKKERDGSEFHTTERVKEEYMAQEPENVTRTLFPVIADKGGRLSDSKLGLWGKTQWLNLSISEPDAQNGVRTLQQKQPQVRKSRRGPRSRSSHYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFSLSDYEEDLKQMKGLSKEEFVLMIRRQTNGILRRSSAYRGGLALHKYGQGARMGPFVSKTFCHMPPLIKFDDEVEKPCTYKGEIITNPSKTGTFHNLDLSLGISSSSKQLNGSDSGSGFFFGYTDCKIPKERGTMEKALENRIKDVPLQQFSNLAWQLCSNGSIVLGPLQSSAASSGFVSSSSFSITHHASNQHAQ 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi863g00011 406 FunFam AP2-like ethylene-responsive transcription factor 154 213 - -
Sebi863g00011 406 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 125 271 - -
Sebi863g00011 406 SMART rav1_2 155 217 IPR001471 GO:0003700|GO:0006355
Sebi863g00011 406 MobiDBLite consensus disorder prediction 31 56 - -
Sebi863g00011 406 ProSiteProfiles AP2/ERF domain profile. 155 211 IPR001471 GO:0003700|GO:0006355
Sebi863g00011 406 CDD AP2 155 210 IPR001471 GO:0003700|GO:0006355
Sebi863g00011 406 SUPERFAMILY DNA-binding domain 154 212 IPR016177 GO:0003677
Sebi863g00011 406 Gene3D AP2/ERF domain 154 213 IPR036955 GO:0003700|GO:0006355
Sebi863g00011 406 Pfam AP2 domain 154 203 IPR001471 GO:0003700|GO:0006355
Sebi863g00011 406 MobiDBLite consensus disorder prediction 129 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi863g00011 Sebi-Chr863 242095 245586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi863g00011 3 269 AP2-EREBP Transcription Factor Family AT2G28550 52.143 1.15e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi863g00011 AP2 3.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi863g00011 K09284 - gmx:100776138 526.168