Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi860g00014 ATGAAAACAGTGAGGAAGAGGGTGGCTGAAATGATAAAGAATCAACCGTCACACTGTTGGTGGCTTAACAGACACAGCACCACTAAACGATCCCCCTGGCTCCAATCCACACTCAATGAGCTAAATGAGAAGACAAAGGGAATGCTAAAATTAATTGAAGAAGATGCAGATTCCTTTGGCCAACGTGCTGAGATGTATTACAAGAAGAGGCCAGAGCTTGTGAGCATGGTTCAAGATTTCTATAGGACACACCGTTCTTTAGCTGAGAGATATGATCAAGTCAAACCTGACACTGGAATTCGCCTCCTCAAGACAGGGGAATCCCCTTTTGCTTCATCAAAGTTTCATCAATCAGACAAGTTGATGACTTTTGCTGATAATAATAAAGGCTATGATAGCTATTCTGAGAATTGTGACGTAGAGGAGTCTGAAGTTGATTATCTTGAGCAAGAAAAAAAAGAGGGTACCAAATTTGATTACAATAAAGAAAAGAAGGAAGTTCAGTTTGTGGCTGCAAATGATGAAGTACTGAAGAGGCTGAGGGAAGAGATTGAGAGACTCAATGAAGAGAACAAGGCCCATAAGGATCAGATCAAGCAGATAGATAACATTCGCGATGAAGTAATGATGTTGAGGGAAGAAATAGAAATACTCAGAGAAGAGAACAAAGAGCAGAAGGATGAGCTCAAGCAGAAAGATACCATTTGTGATGAAGTAATGGTGTTAAGGGAAGAGATGGAAAGAGTTAGAGAAGAGAATATGGCACAAAAGTATTGTCTCAAGCAGAAAGATGAAGAGAAAATAGAGGTGATAAGACACTTGAGTGTAGCAATAGATTTACTGAAGCAGGAGAATGTAAAGATGAGAAGCTTCATTACTACCAAGAAATGGAAGAATCCCTTTGAGTTCAACAAACTCATTAAAGCATTATCGGGGAAGTTGTTTCATCCAAGGACTCAGCCTATGGCAGAAGGTGTTATTGTGACTATGGGTTTCAATTCTAACTCTAGCTCTACTGTGGTGATGAGGTTATCATTGTCCGAAGAAAATTCCCCTGTGCATGCCCTTACTCTGTTTGTGCTTCTTCTTTGTGCTTGTATTATCATTGGTCATCTTCTCGATAAGAGTCGATGGATGACTGAGTCAGTCATTGCCCTCATCATTGGCCTTGTTGCTGGAAACTTTATTATATTCGCAACTGGGTTGGGCCATTCACGCATCTTAGTATTCGATGAACAGCTTTTCTTTGCGTATCTTCTTCCACCCATCATTTTTAATGCAGGGTTCCAGGTGAAAAAGAAGCGATTTTTTCGAAACTTCTTGGCAATTATTTCATATGGTGTTCTTGGGACGCTAATAATGTTTCTCATTGTCTCACTGGGTTCATCCCTATTTTTCAAAAAATTGGAAATTTCACTGGACATGGGTGACTATTTAGCACTTGGTGCAGTGTTTTCAGCTACAGATTCTATTTGCACATTACAGGCGCTTAATCAGGAAGAGACGCCTCTTCTATACAGCATAGTTTTTGGTGAAAATGTGGTCAATGATGCCACATCTGTTCTTCTTTTTAATGCAATCCAGAAACTTGACCTCTCAAACATCACCTCAACCAATGTTAGACAGCTTGTTGGAAATTTTTTTGACTTATTTGTGACAAGCACATTGATGGGAGTAGTTGTTGGCTTGTTTAGTGCTTACATGACAAAGAAGTTGTGTTTTGGCAGGCATTCCACTGATCGAGAAGTTGCTCTTATGATCCTAATCGCCTACTTTTCTTATATCTTCGCTGAACTTCTGGGTTTAAGTGGGATCCTTACGGTGTTCTTCTGTGGGATTCTCATGTCCCATTACACCTGGCATAATGTCGCAGAGAACTCTAAAATCACAAGCAGTCCATGGACAGTGATTTGGGCATCTGCAATACTGCTTCTCTTGGTTCTGCTTGGAAGGGCAGCTTTTGTGTTCCCCCTATCATTTATAGGCAATTTTTTCCGAAAGTCTGAGACTGACAAGATTGGTCTTAAGCAGCAGTTTGTAATATGGTGGGCTGGGCTCATGCGAGGTGCTGTATCCATTGCACTTGCATATAAGAAGTTTACTATATTAGGGCGTACTAGACTGCCAGGGAATGCTATGATGATCAGCAGCACCATTACAGTTGTTATCTTAACTAATGTGGTGGGTGGATTAGTGACTAAGCCTCTAATAAGGTTGTTGTTGGGTAGGACTACTACTCTGTCTCCTGCTGCAGGGTCGAATGGGCAGCAACATATTTCAGAATCCAATAGACAAACGATCCATCATTATTGGCGAATGTTTGATGATACTTTCATGCGCCCTGTTTTTGGTGGCAGGGGATTTCTACCACCTCTTATTCCTGCAGCTGCTTCACCAGGAGAGGGCACTAGCAAAACCCAAAATTAA 2427 0.41 MKTVRKRVAEMIKNQPSHCWWLNRHSTTKRSPWLQSTLNELNEKTKGMLKLIEEDADSFGQRAEMYYKKRPELVSMVQDFYRTHRSLAERYDQVKPDTGIRLLKTGESPFASSKFHQSDKLMTFADNNKGYDSYSENCDVEESEVDYLEQEKKEGTKFDYNKEKKEVQFVAANDEVLKRLREEIERLNEENKAHKDQIKQIDNIRDEVMMLREEIEILREENKEQKDELKQKDTICDEVMVLREEMERVREENMAQKYCLKQKDEEKIEVIRHLSVAIDLLKQENVKMRSFITTKKWKNPFEFNKLIKALSGKLFHPRTQPMAEGVIVTMGFNSNSSSTVVMRLSLSEENSPVHALTLFVLLLCACIIIGHLLDKSRWMTESVIALIIGLVAGNFIIFATGLGHSRILVFDEQLFFAYLLPPIIFNAGFQVKKKRFFRNFLAIISYGVLGTLIMFLIVSLGSSLFFKKLEISLDMGDYLALGAVFSATDSICTLQALNQEETPLLYSIVFGENVVNDATSVLLFNAIQKLDLSNITSTNVRQLVGNFFDLFVTSTLMGVVVGLFSAYMTKKLCFGRHSTDREVALMILIAYFSYIFAELLGLSGILTVFFCGILMSHYTWHNVAENSKITSSPWTVIWASAILLLLVLLGRAAFVFPLSFIGNFFRKSETDKIGLKQQFVIWWAGLMRGAVSIALAYKKFTILGRTRLPGNAMMISSTITVVILTNVVGGLVTKPLIRLLLGRTTTLSPAAGSNGQQHISESNRQTIHHYWRMFDDTFMRPVFGGRGFLPPLIPAAASPGEGTSKTQN 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi860g00014 808 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 17 98 IPR011684 GO:0003779
Sebi860g00014 808 Coils Coil 131 151 - -
Sebi860g00014 808 PRINTS Na+/H+ exchanger signature 414 425 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi860g00014 808 PRINTS Na+/H+ exchanger signature 428 442 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi860g00014 808 PRINTS Na+/H+ exchanger signature 443 451 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi860g00014 808 PRINTS Na+/H+ exchanger signature 482 492 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi860g00014 808 Pfam Sodium/hydrogen exchanger family 360 625 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi860g00014 808 Pfam Sodium/hydrogen exchanger family 633 737 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi860g00014 808 Pfam KIP1-like protein 20 92 IPR011684 GO:0003779
Sebi860g00014 808 Gene3D - 474 526 - -
Sebi860g00014 808 PANTHER SODIUM/HYDROGEN EXCHANGER 345 783 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Sebi860g00014 808 Coils Coil 170 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi860g00014 Sebi-Chr860 231341 245859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi860g00014 347 804 Antiporters AT3G05030 53.409 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi860g00014 - K14724 qsu:112020558 552.747