Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi860g00013 ATGGGTTTCAATTCCAGTTCTAATGCGGTGATGAGGTTAGGGTTATCTTCATCCCATGAAAATCCCTCTGTGTATGCCATTACTCTATTTGTGGTTCTTCTTTGTGCTTGTATCATCATTGGCCACCTTCTCGAAAAGAGTCGATGGATGACTGAATCAGTCATTGCCCTCATCATTGGCCTTGTTGCCGGAAACATAATTCTATTCGCGACTGGGAGGAGGCGTTCACACGTTTTAGTATTCAATGAAAAACTTTTCTTTGTGTATCTTCTTCCACCCATCATATTTAATGCCGGGTTCCAGGTGAAAAAGAAGCAATTTTTTCGGAACTTTTTGGCTATAATTTTGTATGGTGTTGTTGGGACCCTAATGTCGTTTCTCGTTGTATCACTGGGTTCGTTCCTGTTGTTCAAAAAATTGGGCATTGATTCACTGGACTTGGGTGACTATTTAGCACTTGGTGCAGCATTTTCAGCTACAGGTTCTGTCTGCACATTACAGGCGCTTAATAAGGAAGAGACACCTCTTCTGTACAGTTTAGTTTTTGGTGAAGATGTGGTCAATGATGCCACATCTGTGGTTCTTTTTCATGTAATCCAAGGATTTGATCTCGCAAACATCACCTGGGCCAATGCCAGGCAGCTTGTGGAAAATTTTTTTGGTTTATTCGTGACAAGCACTTTGCTGGGAGTAGCTGTTGGCTTGCTTAGTGCTTACATTATAAAGAAGTTCTATTTTGGCAGGCATTCTACTGATCGAGAAGTTGCTCTTATGATCCTGTTGGCTTACTTTTCTTACATATTTGCTGAAATTATCGATTTAAGTGGGATCCTTACCGTGTTCTTCTGTGGGATTCTCATGTCCCATTACACCTGGCATAATACCGCAAAAAATTCTAGAATCACAAGTAGGCATACTTTTGCAACAATTTCTTTTATCGTCGAGAGTTTCATCTTCTTGTATGTTGGTGTGCATGCATTGGATACAGACAACATGATATTTGTCAGCAACAGTTCATCAACATTACTTGGGACATCTGCAATACTGCTTTGCTTGGTTCTGCTTGGAAGGGCAGCTTTTGTGTTCCCCCTATCATTTGTTGCCAATTTTTTCCGCAAGTCTGAGAATGACAAGATTGGTTTTAAGCAGCAGTTTGTAATATGGTGGGCTGGGATTATGCGAGGTGCTGTATCCATTGCACTTGTATTTAAGAAGTTTAGTATGTCAGGACATTCTCGACTGGAAGGGGATGCTATCATGATCACCAGCACCATAACAGTGGTTCTCTTAACTAATGTGGTGGGTGGATTACTAACCAAGCCTCTAATAAGGTTGTTGTTGGATTCCCATAGGCATGTGGGTAGCTCAATGTCATCTGGGCTGTTTTCTACCAGGAATCTGCCTCTACTCTCCAATGGACAACATTCAGATCAATCTAATAGAGACACCGGCAACCCCCTTGACTCGAATCAAACTGTCCATCACTATTGGCGAATGTTTGATGATACTTTCATGCGCCCTGTTTTTGGTGGCAGGGGATTTGCACAACCTGTTATTCCTGATTCACCAAGAGAGACAGAGGGCACTAGCAAAAGCGAAAATTAA 1605 0.4174 MGFNSSSNAVMRLGLSSSHENPSVYAITLFVVLLCACIIIGHLLEKSRWMTESVIALIIGLVAGNIILFATGRRRSHVLVFNEKLFFVYLLPPIIFNAGFQVKKKQFFRNFLAIILYGVVGTLMSFLVVSLGSFLLFKKLGIDSLDLGDYLALGAAFSATGSVCTLQALNKEETPLLYSLVFGEDVVNDATSVVLFHVIQGFDLANITWANARQLVENFFGLFVTSTLLGVAVGLLSAYIIKKFYFGRHSTDREVALMILLAYFSYIFAEIIDLSGILTVFFCGILMSHYTWHNTAKNSRITSRHTFATISFIVESFIFLYVGVHALDTDNMIFVSNSSSTLLGTSAILLCLVLLGRAAFVFPLSFVANFFRKSENDKIGFKQQFVIWWAGIMRGAVSIALVFKKFSMSGHSRLEGDAIMITSTITVVLLTNVVGGLLTKPLIRLLLDSHRHVGSSMSSGLFSTRNLPLLSNGQHSDQSNRDTGNPLDSNQTVHHYWRMFDDTFMRPVFGGRGFAQPVIPDSPRETEGTSKSEN 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi860g00013 534 Gene3D - 23 451 IPR038770 -
Sebi860g00013 534 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi860g00013 534 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi860g00013 534 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi860g00013 534 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi860g00013 534 MobiDBLite consensus disorder prediction 515 534 - -
Sebi860g00013 534 Pfam Sodium/hydrogen exchanger family 31 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi860g00013 534 PANTHER SODIUM/HYDROGEN EXCHANGER 17 509 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Sebi860g00013 534 NCBIfam sodium/hydrogen exchanger 3 23 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi860g00013 Sebi-Chr860 215063 224333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi860g00013 17 525 Antiporters AT3G05030 59.696 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi860g00013 - - cave:132168792 639.417