Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi860g00010 ATGTCGAAGAGAGGTCGTGGTGGATCGGCTGGGAACAAGTTCCGTATGTCACTGGGTCGGCCGGTGGCGGCGACGGTGAACTGCGCCGATAACACCGGAGCGAAGAACCTTTACATCATATCAGTGAAGGGGATCAAGGGTAGATTGAACCGTCTCCCTTCCGCTTGCGTTGGAGACATGGATGGCCACCGTGAAGAAGGGGAAGCCCGATCTCAGGAAGAAGGTGTTGCCAGCTGTCATCGTTCGTCAGCGCAAGCCCTGGCGCAGAAAGGACGGTGTTTTCATGTACTTCGAAGTGTCCTTTCTTCTGGTTGGTCATTCATACTGCGAAGCATATAG 339 0.5428 MSKRGRGGSAGNKFRMSLGRPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMDGHREEGEARSQEEGVASCHRSSAQALAQKGRCFHVLRSVLSSGWSFILRSI 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi860g00010 112 Gene3D Ribosomal protein L14 1 61 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi860g00010 112 SUPERFAMILY Ribosomal protein L14 11 60 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi860g00010 112 Pfam Ribosomal protein L14p/L23e 23 60 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi860g00010 112 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 21 60 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi860g00010 Sebi-Chr860 111928 112359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi860g00010 1 60 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 95.000 2.21e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi860g00010 K02894 - aof:109845384 120.938