Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi860g00002 ATGGAGCACAATGAATGTCAGGCATTTGAAATTGATGAGCCTAAAGATATTTTTTTGGGTCAAGTTGTGTATAGCAAAGATGAAGCTTATAACTTATACCAAGAACATGCATTCAAAATGGGTTTTAGTGTAAGAAGAGGGAGGGCGTTGTACTATGATAGTGAGAAAAAGAATATACGTTTGAAAGACTATTATTGTTCCAAACAGGGGTTTAAGAATAATGAACCTCAAGGTGAAGTGACTTATGAAAGAGCAGATTCAAGAACAAATTGCCAAGCTATGGTGAGATTTAATGTGAGTAAGGAAGGATTATGGAAAATTACAAAGCTGGAATTAAATCACAACCATGACTTTGTGCCACCTGAGCAAAGGCATTTGTTGCGTTCTATGAGAAATATGTCAAATGCCAAAGGAGACCTCATAAAATCCATGGTGAATGCCGGTATGAGAGTTACTAATATTTGGAGTTATTTAGGAGAAGAGGTTGGTGGGTGTGATAACCTCGGTATAACAATGAAAGATATGCATAATTATGTTTACTCTGAAAAGATGAAATTAATTGATGCTGGTGATGCCCAGGCTTTAGTGAACCACTTACAAAGTAGACAAGCACAAGATGCAATGTTCTACTATAGTGTTCAGTTAGACCAGGAATCAC 658 0.3647 MEHNECQAFEIDEPKDIFLGQVVYSKDEAYNLYQEHAFKMGFSVRRGRALYYDSEKKNIRLKDYYCSKQGFKNNEPQGEVTYERADSRTNCQAMVRFNVSKEGLWKITKLELNHNHDFVPPEQRHLLRSMRNMSNAKGDLIKSMVNAGMRVTNIWSYLGEEVGGCDNLGITMKDMHNYVYSEKMKLIDAGDAQALVNHLQSRQAQDAMFYYSVQLDQES 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi860g00002 219 Pfam FAR1 DNA-binding domain 32 120 IPR004330 -
Sebi860g00002 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi860g00002 Sebi-Chr860 22228 22885 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi860g00002 FAR1 1.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi860g00002 - - tpra:123905334 370.548