Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00129 ATGGGTCTTCCTGCACCTCTTCTTTTCAATCAACAAGATTCCTACTTTGCAGTGGAATTTGACACCAGTTTTGACCCTTCTCTTGGTGACATTAATGGGAACCACATTGGCATTGATGTCAATAGTGTCGTATCTTTGGCTTCTGTGGATGTTCTTTCTCGTGGAATTGACTTGAAAAGTGGGAAATTGATCACTGCTTGGATTGAATACAGAGATTCCATGAAAATGGTTCGTGTGTGGGTTGGTTACTCTTCAACTAGACCTCCATCTCCAATTCTTGTTTCCCAGATAGACCTTTCTGAGAAACTCAAGGAGTTCATGCATGTGGGGTTCTCTGCCTCTAATGGACAGGGCTCAGGGGATTCAATCACATCCACCAAACACAATGGTGCAAATAACAGAAGGAAAAAGATTGAGGAGTTGGCTCTTGGATTGGGAGGGATAACAGCTTTTGTAGTGTCAGCATTGGCAGCAGTTTTTGTGATCTGTGTTTTCTTGACAAAGAAAAAGGGTGTTGTTAGACAGAAAAAGGAAGGTCAAAATTGTAGATTTCAGACAAATAAAGTGCCTATGAGATTGACACTTTCGGAGATCAAAGTGGCCACAATGGGGTTTAATAGAGATAGACTTGTTGGGGAAGGTGCATCAGCTAAGGTTTATAAAGGGTCTCTTCCATTTGGTGGTGATGTGGCAGTGAAAAGATTTGAGAGAGCTGATGATTTAGATTGTCTACACAATCCATTCGCCACTGAGTTTGCTACAATGGTGGGTTATTTGAAGCACAAAAACTTGGTTCAGCTTAAGGGATGGTGTTGTGAGGGGAATGAGTTGGTACTGGTTTATGAGTACCTACCCAATGGGAGCTTGGATAAAGTTCTGCATAGAAACTTCAATTCTTCAATTGTTCTTTCATGGAAGCAAAGAGTTAATATAGTTCTAGGGGTTGCTTCTGCTCTTACCTATCTTCATGAAGAATGTGAGAGGCAGATCATTCATAGAGATGTTAAGACTTGCAATATAATGCTTGATGCAGATTTCAATGCCAAGCTTGGGGATTTTGGACTTGCAGAAGTGTATGAACATAGTTCTATCACAAGGGATGCTACTATACCAGCAGGGACAATGGGTTATCTTGCTCCTGAATATGTGTATACTGGTGTTCCTACTGTAAAAACTGATGTGTATAGCTTTGGGGTAGTGATGATAGAAGTGGCAACTGGGAGGAAGCCTGTGGAAGATGATGGCACTGTGGTTGGTGATTATGTGTGGAACTTGTGGGAAAAGAACAAACTCATTGAGGCTGCTGATCCAAGATTGATGGGGAAGTTTGATGCATTGGAGATGGAAAGGATGCTTCTGGTGGGGGCTTCTTTGTGTACACCCTGA 1386 0.4192 MGLPAPLLFNQQDSYFAVEFDTSFDPSLGDINGNHIGIDVNSVVSLASVDVLSRGIDLKSGKLITAWIEYRDSMKMVRVWVGYSSTRPPSPILVSQIDLSEKLKEFMHVGFSASNGQGSGDSITSTKHNGANNRRKKIEELALGLGGITAFVVSALAAVFVICVFLTKKKGVVRQKKEGQNCRFQTNKVPMRLTLSEIKVATMGFNRDRLVGEGASAKVYKGSLPFGGDVAVKRFERADDLDCLHNPFATEFATMVGYLKHKNLVQLKGWCCEGNELVLVYEYLPNGSLDKVLHRNFNSSIVLSWKQRVNIVLGVASALTYLHEECERQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSSITRDATIPAGTMGYLAPEYVYTGVPTVKTDVYSFGVVMIEVATGRKPVEDDGTVVGDYVWNLWEKNKLIEAADPRLMGKFDALEMERMLLVGASLCTP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00129 461 Gene3D - 2 131 - -
Sebi85g00129 461 SUPERFAMILY Protein kinase-like (PK-like) 184 448 IPR011009 -
Sebi85g00129 461 FunFam Lectin-domain containing receptor kinase A4.3 284 461 - -
Sebi85g00129 461 CDD lectin_legume_LecRK_Arcelin_ConA 10 117 IPR001220 GO:0030246
Sebi85g00129 461 ProSitePatterns Protein kinases ATP-binding region signature. 211 233 IPR017441 GO:0005524
Sebi85g00129 461 Pfam Protein kinase domain 206 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi85g00129 461 Pfam Legume lectin domain 10 126 IPR001220 GO:0030246
Sebi85g00129 461 PANTHER - 11 459 - -
Sebi85g00129 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Sebi85g00129 461 Gene3D Phosphorylase Kinase; domain 1 166 283 - -
Sebi85g00129 461 SMART serkin_6 205 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi85g00129 461 ProSiteProfiles Protein kinase domain profile. 205 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi85g00129 461 FunFam L-type lectin-domain containing receptor kinase S.6 168 283 - -
Sebi85g00129 461 SUPERFAMILY Concanavalin A-like lectins/glucanases 13 120 IPR013320 -
Sebi85g00129 461 Gene3D Transferase(Phosphotransferase) domain 1 284 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00129 Sebi-Chr85 2148812 2150302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00129 1 461 Receptor kinase-like Gene Family AT5G42120 55.070 2.81e-177 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Sebi85g00129 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00129 - - gmx:100783805 698.738