Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00124 ATGTCTTTCAATATTCCAATATGCACCGGGCGGTTAGTCAACAATATCATCAAGCCTTCTATAGAAGAAGATAAGCATGAGGATATCCAAGAGAGCAATGGACATGTGAGCCTAACCATCACCAAGTGCACTGGGGAGACAAATGCTAATTTGGCTAAAATAATTACCAATTATGTGGGGACACTAAATCAAAACAAATTGCGCTTTTTGGGCTATCCCACTAATCTGGATTTCGATTATGCTGCATTGAAACCATTGTTGCAATTTCACCTAAACAATGCTGGCGATCCATTTCTAGGGAGCAGCTACTCTATGAATTCAACAGCATTTGAAGTGTGCGTACTTGACTGGTTTGCAAATTTGTGGGAGATAGAGAAGAGTGAGTATTGGGGATATGTCACAACTGGTGGAACTGAAGGCAATCTTCACGGCATTCTACTAGGGAGAGAACAATTTCCAGATGGGATCTTATATGCCTCAGAAAATTCACATTATTCAATATTCAAAATAGCAAGAATGTATCGAATGCAGTGCGTGAAGGTTGGCACTTTGGTGTCTGGTGAAATTGATTATGCTGAACTACATGCTTCACTACTTGCTCACAAGGACAAGCCAGCCATCATCAATCTAAACATAGGAACAACTATGAAAGGAGCTATTGATGATGTTGATCTCGTAATACAAACACTTGGGGAAAGTGGCTTCCCTCGCAATCGATTCTATATTCACTGTGATGGAGCTCTATTTGGAATGATGTTGCCGTTTCTTAAAAAAGCTCCAAGGACTACCTTCAAGAAGCCCATTGGAAGTATAGCCATTTCTGGCCATAAGTTCTTTGGATGCCCAATTCCTTGTGGTGTTGTAATAACTCGTTTAGAACATATAAATGTTCTATCTAAAGATGTTGAATACATTGCTTCAAAGGATGTCACAATCACGGGTAGCCGTTGTGGGCATGCTCCAATGTTCCTCTGGTATGCTATCCAAGAGAGAGGTTTAATAGGATTTGAGAAGGAAGTGGAAATGTGCATCATGAATGCACGTCACTTACTGGATCAACTACGTCATGCTGGCATTGGTGCAATGTTGAATGAGTTTAGTAATACAGTTGTTTTTGAAAGGCCTCTTGATGATGAATTTACAAGTAGGTGGAGTTTGGCTTGCAAAGGTAATATTGCACATGTGGTTGTAATGCAACATGTCACTATTGAAATGCTAGACTCTTTTGTTGTTGAATTAGTTCAACAACGACTCATTTGGTATCCAGATGGACTAAGAAAGCCTCCTTGCATTGCAAGTGATATTGGTGCAGAAAATTGTGCTTGTACATTGCATAATTCATTCTCATAG 1350 0.3978 MSFNIPICTGRLVNNIIKPSIEEDKHEDIQESNGHVSLTITKCTGETNANLAKIITNYVGTLNQNKLRFLGYPTNLDFDYAALKPLLQFHLNNAGDPFLGSSYSMNSTAFEVCVLDWFANLWEIEKSEYWGYVTTGGTEGNLHGILLGREQFPDGILYASENSHYSIFKIARMYRMQCVKVGTLVSGEIDYAELHASLLAHKDKPAIINLNIGTTMKGAIDDVDLVIQTLGESGFPRNRFYIHCDGALFGMMLPFLKKAPRTTFKKPIGSIAISGHKFFGCPIPCGVVITRLEHINVLSKDVEYIASKDVTITGSRCGHAPMFLWYAIQERGLIGFEKEVEMCIMNARHLLDQLRHAGIGAMLNEFSNTVVFERPLDDEFTSRWSLACKGNIAHVVVMQHVTIEMLDSFVVELVQQRLIWYPDGLRKPPCIASDIGAENCACTLHNSFS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00124 449 PANTHER - 32 446 - -
Sebi85g00124 449 Gene3D Aspartate Aminotransferase, domain 1 329 417 IPR015422 GO:0003824
Sebi85g00124 449 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 270 291 IPR021115 GO:0016831
Sebi85g00124 449 SUPERFAMILY PLP-dependent transferases 66 414 IPR015424 -
Sebi85g00124 449 Gene3D - 85 328 IPR015421 GO:0003824
Sebi85g00124 449 Pfam Pyridoxal-dependent decarboxylase conserved domain 106 365 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00124 Sebi-Chr85 2020029 2022366 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00124 212 358 Calmodulin-binding Proteins AT3G17760 27.950 1.59e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00124 K25193 - gmx:100781665 662.529