Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00114 ATGGGTATAAAGATCACAGCTCAGGGGCTTGAACATGCTATTGCTGGCACTGGTTTATATGTGGTGAAGCCTGATGATGATTTGGAAGATGTTAAAGAAGTTGCTATGGAAGATATGCGGTCAGTCATGAGCAGGATTGACAGGAGCGGTGAGGGTGTTTGTGTACAAGCATCCACCCTTGGCTCATTGGAAGCATTACTGGAGTTTTTGAAAACTCCGGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGCCCTGTACATAAAAAGGATGTAATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCTTTTGATGTCAAAGTCACTCCTGAGGCTAGGGAACTTGCAGATGAATTGGGTGTGAAAATTTTTATTGCTGATATCATTTATCATCTGTTTGATCAATTTAAAGCTTATATTGACAACATTAAGGAAGAGAAAAAGAGAGAAGCTGCTGATGAGGCAGTCTTCCCATGTGTTCTGAAAATCTTACCGAATTGCGTCTTCAACAAGAAGGATCCAATTGTTTTGGGAGTTGATGTCCTTGAAGGCATTGCAAAGATCTACCTTTTTTTGAGTTATGGTGTTAATAGTATCATGTCAGGAAGTTGGTACTCCAATATGTATTCCTTCAGAGAGTTCATTGATATTGGTCGCATTGCCTCTGTTGAGAATAACCATAAACCTGTTGATTATGCAAAGAAGGGGCAGAAAGTCGCCATTAAGATTGTTGGCAGCAATCCTGAGGAGCAACAAAAATGTTTGGGCGGCATTTTGAGATTGACGATGAACTGTAAGCCATATTTCACGGAGATCTATCGATATACTCAAAGCTAA 858 0.3998 MGIKITAQGLEHAIAGTGLYVVKPDDDLEDVKEVAMEDMRSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNIKEEKKREAADEAVFPCVLKILPNCVFNKKDPIVLGVDVLEGIAKIYLFLSYGVNSIMSGSWYSNMYSFREFIDIGRIASVENNHKPVDYAKKGQKVAIKIVGSNPEEQQKCLGGILRLTMNCKPYFTEIYRYTQS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00114 285 Gene3D Translation factors 158 267 - -
Sebi85g00114 285 SUPERFAMILY Translation proteins 162 273 IPR009000 -
Sebi85g00114 285 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 28 157 IPR036925 -
Sebi85g00114 285 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 258 IPR015760 -
Sebi85g00114 285 Gene3D Translation factors 1 46 - -
Sebi85g00114 285 FunFam Eukaryotic translation initiation factor 5B 45 151 - -
Sebi85g00114 285 Pfam Translation-initiation factor 2 30 144 IPR023115 -
Sebi85g00114 285 Gene3D - 47 151 IPR036925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00114 Sebi-Chr85 1739120 1741543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00114 1 259 Eukaryotic Initiation Factors Gene Family AT1G76810 78.764 5.32e-123 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00114 K03243 - gmx:100814640 428.713