Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00100 ATGGCGTCGTCGAAGATGATGCCGTCTTCCGATTCAACAAAGTCTGATTCCAAACCCCAATTCACCACCGCCACTTTCATGCCCATTTCCGACCACGCCGTCGATTCCACCCTCCTCGACGCTCAAATCTCCCTCGTCGACACCGCCGCAGCAGCCGCTCCCCCAAAATCCGTCGACGACGTCTGGCGGGAGATCGTCGCCGGCGAACGCAGGGAGTTCAAGGAGGAAGCTCCCGACGAGATGATGACCCTCGAGGATTTCCTCGTTAAGGCCGGCGCCGTCGACGACGAAGACGAGGAGGAGGTCAAGATGCCAGTCCCCCTCACCGAGAGGCTGAGTGGCAGTGCCGGCGGAGGAGGGAGAGGGAAGAGGGGGCGTCCCGTTTTGGAGCAATTGGATAAGGCTGCGCAGCAGAGGCAGAGGAGGATGATCAAGAACAGAGAATCTGCTGCTAGGTCTAGGGAACGCAAGCAGGCTTACCAAGTGGAATTGGAGTCTTTGGCGGTGAAGCTAGAGGAAGAAAATGACAAGTTGTTGAAGGAAAAGGCTGAGAAGAAAAAGGAGAGGTTCAAGCAGCTTATGGAGAAAGTGATCCCTGTTGTGGAGAAGCGGAGGCCACCACCTTTCAAGCACAAGCAACACTACAGCCTCTACATTTTCAAGAACCAGGAAGCCTTCAATCTCTGCAATTTCACTCAAGCCACTATTCTCACCAGTCCCAACACTACCTCTTACACGTGGCATCCATCTCGCCCTGGTTTCTTCTACTTTACCTTCAACAATGGCTCACTCAAATCATGCCAAGATTCTCAAAAGCTAGCCATAAAGGTTACTCCAGCAGTAGCAGCACCACCACCACAAAGTTCAGAACTTTCTCCAATAGCAACTCCAGCTCCCTCTTCTGGTGGAGAGGTACCATCTTCCCCTTCATTCCCATGGCCATTCCGTCCTCGCCAAGCAGCATCACCTGGTCCAGCACCAACTGCAACAGTTCCATTAGTACCAGACAAAGGTGGTGGCATGCCCTTCATTAACAGCAACCCTGCAGTTCCTCTGCCTACAGGTGAAGTAGATTCTGCTACCATACGCCCCCTACCCACCTCTGGTAATCAAGGACAGGTGATGATGATTGGGTCATTTGGATTTCCTATTGCTGTGCACACCATGGCTTTACTGCTGCTGTAA 1185 0.5291 MASSKMMPSSDSTKSDSKPQFTTATFMPISDHAVDSTLLDAQISLVDTAAAAAPPKSVDDVWREIVAGERREFKEEAPDEMMTLEDFLVKAGAVDDEDEEEVKMPVPLTERLSGSAGGGGRGKRGRPVLEQLDKAAQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAEKKKERFKQLMEKVIPVVEKRRPPPFKHKQHYSLYIFKNQEAFNLCNFTQATILTSPNTTSYTWHPSRPGFFYFTFNNGSLKSCQDSQKLAIKVTPAVAAPPPQSSELSPIATPAPSSGGEVPSSPSFPWPFRPRQAASPGPAPTATVPLVPDKGGGMPFINSNPAVPLPTGEVDSATIRPLPTSGNQGQVMMIGSFGFPIAVHTMALLLL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00100 394 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 136 188 IPR004827 GO:0003700|GO:0006355
Sebi85g00100 394 Coils Coil 157 196 - -
Sebi85g00100 394 PANTHER OS04G0422700 PROTEIN 209 392 - -
Sebi85g00100 394 Gene3D - 188 280 IPR008972 -
Sebi85g00100 394 MobiDBLite consensus disorder prediction 134 155 - -
Sebi85g00100 394 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 136 194 - -
Sebi85g00100 394 CDD bZIP_plant_BZIP46 138 176 - -
Sebi85g00100 394 MobiDBLite consensus disorder prediction 282 338 - -
Sebi85g00100 394 Pfam bZIP transcription factor 136 192 IPR004827 GO:0003700|GO:0006355
Sebi85g00100 394 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 141 156 IPR004827 GO:0003700|GO:0006355
Sebi85g00100 394 SMART brlzneu 134 196 IPR004827 GO:0003700|GO:0006355
Sebi85g00100 394 MobiDBLite consensus disorder prediction 293 307 - -
Sebi85g00100 394 MobiDBLite consensus disorder prediction 1 21 - -
Sebi85g00100 394 SUPERFAMILY Cupredoxins 209 277 IPR008972 -
Sebi85g00100 394 Gene3D - 136 187 - -
Sebi85g00100 394 SUPERFAMILY Leucine zipper domain 138 189 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00100 Sebi-Chr85 1448763 1455482 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00100 56 207 bZIP Transcription Factor Family AT1G03970 58.523 2.40e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi85g00100 bZIP_1 5.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00100 - - gmx:100800621 271.166