Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00092 ATGGGCTGTGTTCAGGCCAAGGCATCAGAAGAAGAAGGTTCTGACTACAGGGGCCTAGATAGGTTGAAAATTGAAAATGGGTATATTCCAAGTTCTGACTTTGTTGCTCATAGGAGATCCACTGGTCAAAGACATCAGCCTACGGACTCTGGTACGCTCCATCAGAGAGAACCCACAAAGCATAAAGTTGGCTCACGTGCTGCCAATGCTGAAAGGCAAGGCCTTTCTGGGGGTCGCAGGGCGAAGAGAGATGATGCTGAAAAACATGATAGTAAGAAGCTGTTAAACGAATGTTTTGAGGATGAGATGGTTGATGGGTGGCCCAGATGGTTAGTTGATAATGTTCCTACACAAGCGCTGGCTGGCTTGGTTCCCAAGAGTGCTGAATCATACAAAATGATTGATAAGGTAGGGCAAGGAACCTACAGCAATGTTTATAAAGCTCTAGATCGAGAGACAAGAGAAATTGTGGCCCTCAAGAAGGTCCGATTCAATACATCAGAGCCTGAAAGCATTAAATTCATGGCAAGAGAAATTATGATATTGCAGAGATTGGATCATCCCAATGTAGTAAAACTTAAAGGATTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGACTTCATGCAAACAGATTTGGCAAGAGTTATTGCTCGTCCTGGAGAGAAACTAACTGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGATAGGGGAATTTTGCATCGAGATATAAAGGGGTCAAACCTTTTGATTGATAAAAATGGGATGCTTAAGATCGCAGATTTTGGACTTGCCAATTATTATAATCCAAACCATGAACCGCCTCTCACAAACCGGGTTGTGACACTATGGTACAGAGCTCCTGAGTTGTTGTTAGGTTCCACAAGTTATGGAGTTGGTATTGATCTATGGAGTGCTGGATGTCTCCTGGCAGAAATGTTTAGAGGATTTCCAATCATGCCTGGAAAAACAGAGGTTGAGCAACTTCATAGAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAGAAAATTAAAACTGTCTACAACTTTTAGACCTCCAAAGTCTTATAGACCCAGCCTTGTAGAAACTTTCCGGGATCTCCCTCCATCTTCTTTAGGTCTTTTATGTACTCTTCTTGCTTTGGATCCTGCATTCCGGGGCAGTGCATCTAAAGCTCTCAACAATCAGTTTTTCTTTTCAAGCCCATTGGCATGTGATCTCTCTGGTCTGCCTGTAATTGACAAAGATGATGATGAGCATATTCAAGCCAATGAACAGATCAAGTACATGAACTCTAAAATCAGGCGTTCTCGTACATATCTGGAGCGTCGCAAGAATTTAGCATCTAATCGGCCATTAGAACATACTGTATCATCTAAAGAGGAATTGAGAAGGAATCCTGAGCCTGAAACATCTGTTCCAAATGAAGAAGTGGATAGCACAACAAGTAGTACCTCATCTAGTATAAACCCAGCTGGGGCTATGGACCACTCACCTTTGTTTTTCTCTCCATTTCTGGCTTCAGATCAAAAGCTGCATCCCAAAATCCATCGCCATGCTAATGTTGGTGAAAAAATCATCAAGAACCTTCCTCCATTATCCAAGTCAAAACCAAAAGCAACCAAGAAAGATGACAGCAGATACAGACCAGACCAGGGTTTCAGGTCTTCTTCCACCAGAGAATTTAGAAACTTAAAACGAGAGGAACATTTACTCTTTGAAATTGATGATTAG 1779 0.4199 MGCVQAKASEEEGSDYRGLDRLKIENGYIPSSDFVAHRRSTGQRHQPTDSGTLHQREPTKHKVGSRAANAERQGLSGGRRAKRDDAEKHDSKKLLNECFEDEMVDGWPRWLVDNVPTQALAGLVPKSAESYKMIDKVGQGTYSNVYKALDRETREIVALKKVRFNTSEPESIKFMAREIMILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMQTDLARVIARPGEKLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLKIADFGLANYYNPNHEPPLTNRVVTLWYRAPELLLGSTSYGVGIDLWSAGCLLAEMFRGFPIMPGKTEVEQLHRIFRLCGTPSEEYWRKLKLSTTFRPPKSYRPSLVETFRDLPPSSLGLLCTLLALDPAFRGSASKALNNQFFFSSPLACDLSGLPVIDKDDDEHIQANEQIKYMNSKIRRSRTYLERRKNLASNRPLEHTVSSKEELRRNPEPETSVPNEEVDSTTSSTSSSINPAGAMDHSPLFFSPFLASDQKLHPKIHRHANVGEKIIKNLPPLSKSKPKATKKDDSRYRPDQGFRSSSTREFRNLKREEHLLFEIDD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00092 592 MobiDBLite consensus disorder prediction 488 507 - -
Sebi85g00092 592 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Sebi85g00092 592 MobiDBLite consensus disorder prediction 552 576 - -
Sebi85g00092 592 MobiDBLite consensus disorder prediction 538 576 - -
Sebi85g00092 592 Pfam Protein kinase domain 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi85g00092 592 FunFam Putative serine/threonine-protein kinase 214 451 - -
Sebi85g00092 592 MobiDBLite consensus disorder prediction 76 90 - -
Sebi85g00092 592 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Sebi85g00092 592 MobiDBLite consensus disorder prediction 38 67 - -
Sebi85g00092 592 SUPERFAMILY Protein kinase-like (PK-like) 126 418 IPR011009 -
Sebi85g00092 592 PANTHER CELL DIVISION PROTEIN KINASE 129 418 - -
Sebi85g00092 592 MobiDBLite consensus disorder prediction 460 487 - -
Sebi85g00092 592 MobiDBLite consensus disorder prediction 460 507 - -
Sebi85g00092 592 SMART serkin_6 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi85g00092 592 MobiDBLite consensus disorder prediction 1 90 - -
Sebi85g00092 592 ProSiteProfiles Protein kinase domain profile. 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi85g00092 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Sebi85g00092 592 Gene3D Phosphorylase Kinase; domain 1 123 213 - -
Sebi85g00092 592 Gene3D Transferase(Phosphotransferase) domain 1 214 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00092 Sebi-Chr85 1295042 1301246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00092 126 474 Core Cell Cycle Gene Families AT5G10270 42.779 2.09e-94 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sebi85g00092 Pkinase 4.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00092 K08819 - gmx:100776854 902.894