Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00085 ATGGCCTCCAAAGGTCCCCATACTGATTCAATTGATGCATTGAAGTTTCAAGTTTCTGCTCAGAAGGATCCAAACAAATTCTTCATGTCCATCAGTGATGGAGAGAAAAAGCCATTTGACTTTTTTCGTGCTTTATATGATGGTTGCATTGCTGGAGGTGTTGCTGGTGTTGCTGTAGAAACAGCTCTATACCCCATTGATACCATCAAAACTCGACTACAGGCAAGGGCTAGGAAGGAAGAGGGAAATAATCAATTCATCATTTGCCATACAAGAGGAAGCAGGTTGTGTTGTAGGTCTCAAAATGCAGCGTCACATGCTAATATTCTATTCCCCATTTTAGTGCAGCTTCCATGTGTTGCTCGTGGTGGAGGGAAAATTATTTTGAAGGGTCTATATTCTGGATTGGCTGGAAATCTTGTTGGTGTCTTACCAGCTTCTGCAATTTTTATTGGTGTGTATGAACCTACAAAACAGAAATTGCTGAAGTCCTTGCCGGAGAATCTAAGCGCTGTGGCTCATGTTGCCGCAGGCGTTATTGGAGGCACCGCATCTTCTCTTATTCGTGTTCCAACTGAGGTTATTAAGCAAAGGATGCAAATCGGGCAATTTAAATCAGCCCCAGCTGCTATTCGTCTTATTATTGCTAACGAGGGTTTCAAAGGTCTTTATGCGGGATATGGATCTTTCTTATTGCGAGACTTACCATTTGATGCTATAGAGTTATGCATCTACGAGCAGCTCCGTATCGGGTATAAACTTGCGGCAAAAAGAGATCTGAATGATCCAGAGAATTGTATGCTTGGCGCAGTTGCCGGAGCCATAACTGGAGCAATTACAACTCCTCTTGATGTAGTAAAAACCAGATTGATGGTTCAGGGATCGCAAAAACATTACAAAGGCATTTGTGATTGTGTGAGGACAATAGTTAAAGAAGAAGGAACTCATGCTCTTTTCAAGGGTATTGGGCCGAGAGTTTTGTGGATAGGAGTTGGTGGCTCAATATTTTTTGGTGTTCTTGAGAAGACAAAGCAAATTCTTGCTCAGAGGCATGCCCGAGCTGATGCTCAGAAGTAA 1077 0.4253 MASKGPHTDSIDALKFQVSAQKDPNKFFMSISDGEKKPFDFFRALYDGCIAGGVAGVAVETALYPIDTIKTRLQARARKEEGNNQFIICHTRGSRLCCRSQNAASHANILFPILVQLPCVARGGGKIILKGLYSGLAGNLVGVLPASAIFIGVYEPTKQKLLKSLPENLSAVAHVAAGVIGGTASSLIRVPTEVIKQRMQIGQFKSAPAAIRLIIANEGFKGLYAGYGSFLLRDLPFDAIELCIYEQLRIGYKLAAKRDLNDPENCMLGAVAGAITGAITTPLDVVKTRLMVQGSQKHYKGICDCVRTIVKEEGTHALFKGIGPRVLWIGVGGSIFFGVLEKTKQILAQRHARADAQK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00085 358 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Sebi85g00085 358 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Sebi85g00085 358 PRINTS Mitochondrial carrier protein signature 269 291 IPR002067 GO:0055085
Sebi85g00085 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 264 346 IPR018108 -
Sebi85g00085 358 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 108 358 - -
Sebi85g00085 358 SUPERFAMILY Mitochondrial carrier 49 341 IPR023395 -
Sebi85g00085 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 160 IPR018108 -
Sebi85g00085 358 Pfam Mitochondrial carrier protein 48 163 IPR018108 -
Sebi85g00085 358 Pfam Mitochondrial carrier protein 169 249 IPR018108 -
Sebi85g00085 358 Pfam Mitochondrial carrier protein 263 349 IPR018108 -
Sebi85g00085 358 Gene3D Mitochondrial carrier domain 48 358 IPR023395 -
Sebi85g00085 358 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 34 354 - -
Sebi85g00085 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 251 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00085 Sebi-Chr85 1198757 1206948 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00085 50 356 Chloroplast and Mitochondria Gene Families AT2G30160 29.846 9.58e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00085 K15111 - gmx:100800051 471.47