Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00045 ATGGCCGGCAATTCTGCAACCGCCTCCTCCGCCCCTGCGTACTCTCGCGAGAAATTGAATTTCTCGCCTGATTTCCCCGCACGAATCCCTCTCACTTCCGATCAGGTCAAGTACTGCACCGAGGCGCTCACCTTGTTGAAGGACAAGCTCCGCACTCCTCACACCATCTCCCAAGAGTTCGCTCGCTTGCAGGCGAACAGGATAACGCCGAGTGAGATGGGGAGAAGATGCAACGTAGCTCTTGATGCTGTCAATGCGAGCAAAAATCGATATAGAGACGTGATACCATTTGACAAGAACAGGATTGTTCTCAAATCAAGTACAGATTATAGGCCTGCAGCACTGGGGTATATCAATGCAAGCTTTATCTCGACCTCCTCCCCTGGAACTGTGTCCCAGTTTATAGCTACTCAAGGACCATTGCCACACACTTATGAGGATTTCTGGGAAATGATTATCCAATATCACTGCCCTGCAATTGTGATGCTTACTAGATTGGTCGACAATTACAAGATGATAAAGTGTGGAGATTATTTTCAAGCTGAGGATGGACCTAGAGAATTTGGAAATGTCTCCATTACCAGTAAATGGATACAAACTACTGAATCTTTGCTGGTGCTGCGTCATTTAGAGGTCAACCATAGAGAGGCAGAAGATACAGCATTATCTGTTTTGCATATTCAATATCCTGAATGGCCTGACCATGGAGTTCCAAACAATACATTTTCTGTGCGTGAAATTTTGAAAAGATTATACCACTTACCACCAGAGCATGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGTAGAACGGGAACCTACTGCACAATTCACAACACAATTCAGAGAATACTTGCTGGTGATATGTCTGCTGTAGATATTGCTAACACAATAGCTGTGTTCAGGTCCCAACGTATTGGAATGGTTCAGACCCAGGATCAGTACGTTTTCTGCTATGAAGCTATCATAGATGAACTGGAGGACCTTGTATCTCAACAGTAA 1005 0.4517 MAGNSATASSAPAYSREKLNFSPDFPARIPLTSDQVKYCTEALTLLKDKLRTPHTISQEFARLQANRITPSEMGRRCNVALDAVNASKNRYRDVIPFDKNRIVLKSSTDYRPAALGYINASFISTSSPGTVSQFIATQGPLPHTYEDFWEMIIQYHCPAIVMLTRLVDNYKMIKCGDYFQAEDGPREFGNVSITSKWIQTTESLLVLRHLEVNHREAEDTALSVLHIQYPEWPDHGVPNNTFSVREILKRLYHLPPEHGPIVVHCSAGIGRTGTYCTIHNTIQRILAGDMSAVDIANTIAVFRSQRIGMVQTQDQYVFCYEAIIDELEDLVSQQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00045 334 SMART PTPc_3 55 328 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 41 328 IPR029021 -
Sebi85g00045 334 Pfam Protein-tyrosine phosphatase 85 324 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 245 317 IPR000387 GO:0016311|GO:0016791
Sebi85g00045 334 PRINTS Protein tyrosine phosphatase signature 309 319 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 PRINTS Protein tyrosine phosphatase signature 134 154 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 PRINTS Protein tyrosine phosphatase signature 260 278 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 PRINTS Protein tyrosine phosphatase signature 222 239 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 PRINTS Protein tyrosine phosphatase signature 116 123 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 PRINTS Protein tyrosine phosphatase signature 293 308 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 SMART ptp_7 223 325 IPR003595 -
Sebi85g00045 334 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Sebi85g00045 334 Gene3D Protein tyrosine phosphatase superfamily 32 328 IPR029021 -
Sebi85g00045 334 ProSiteProfiles PTP type protein phosphatase domain profile. 56 326 IPR000242 GO:0004725|GO:0006470
Sebi85g00045 334 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 47 328 - -
Sebi85g00045 334 Coils Coil 324 334 - -
Sebi85g00045 334 CDD PTPc_plant_PTP1 117 321 - -
Sebi85g00045 334 FunFam Tyrosine-protein phosphatase non-receptor type 12 33 334 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00045 34 332 Protein tyrosine phosphatase (PTP) family AT1G71860 67.559 2.33e-160 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00045 - - gmx:548044 551.206