Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00023 ATGGGGGATTCCTATGACACCAAGGACCACCTATTTGGCACTTCCTCTGAACAAACAGAGGATGGTGCTTGCTTATCAGCAATGTTACTGAGTACTAATTTGGTGTATCCAGCGGTTGTGAATGCTGCTATTGAACTCAATTTATTTGAGATCATAGCAAAGGCAACCCCACCAGGTGCTTACATGTCATCCTCTGAAATTGCTTCTAAGATGCCAACTCACCACTCTGACTTGTCTAATAGGCTTGACCGCATGCTGCGTTTGCTTGCCAGCTACTCTGTTCTCACTTGTTGCACTCGCACCACTGAGAATGGTACCACCGAGACAATTTATGGCCTCTCACAAGTTGGAAAATATTTAGTCCCTGATGAGAGTAAGGGCTACTTGGCTTCATTTGTAACATTCCTCTGTTATCCAGCACTGTTACAGGTTTGGTAA 438 0.4452 MGDSYDTKDHLFGTSSEQTEDGACLSAMLLSTNLVYPAVVNAAIELNLFEIIAKATPPGAYMSSSEIASKMPTHHSDLSNRLDRMLRLLASYSVLTCCTRTTENGTTETIYGLSQVGKYLVPDESKGYLASFVTFLCYPALLQVW 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00023 145 PANTHER O-METHYLTRANSFERASE 27 134 IPR016461 GO:0008168
Sebi85g00023 145 Gene3D - 5 120 IPR036388 -
Sebi85g00023 145 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 145 IPR016461 GO:0008168
Sebi85g00023 145 FunFam Caffeic acid 3-O-methyltransferase 6 120 - -
Sebi85g00023 145 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Sebi85g00023 145 SUPERFAMILY "Winged helix" DNA-binding domain 21 124 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00023 Sebi-Chr85 329824 330261 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00023 14 145 Monolignol Biosynthesis Gene Families AT5G54160 42.424 3.20e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00023 - - ag:AAB48059 217.238