Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi85g00019 ATGGGTGATTCCTGCAGTTTCAACAAGGATATAACTTGCTCTGAAAAAACAGAGGATGGTGCTCACCTATCTGCAATGCTACTCAGTACTAATCTGGTGTACTCATCAGTCCTCAATGCTGCTATTGACCTCAATTTATTTGACATCATAGCTAAGGCAACCCCACCTGGTTCTTTCATCTCATCCTCCCAAATTGCCTCTAAGATGCCATTACAAAACCAACACAAAGACTTGCCCAATAGGCTTGACCGCATGCTCCGTATGCTTGCCAGTTACAACATTCTCACTTTTGCCACTCGGCCCACTCAGAATGGCACCACCGAGAGAGTTTATGGCCTCTCACAAGTTGGAAAACACTTTGTCCCTGATGACACTAAGGGCAACAATGCTTCATTCGTATCATATCTCTCTTATCCAGCACTGTTACAAGTTTGGTTGAACTTCAAGGAAGCTGTGATTAATGAAGACATTGACCTGTTCAAGAAACTTCATGGAGTAACTGTGTATGAGTACATGGACAAGGATCCTAAACTTAGCTACATTTTTAACAAGGCTATGGCCGATATGTCTACAAAAGTGATGGAAAAAGTACTTGACACATATACTGGATTTGAGGGAATATCAACATTGGTTGATGTAGGAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAAGTGTTCCACAGGGTGACGCCATGTTACTAAAGAGTATATGCCATAATTGGTCAGATGAAAAATGCATAGAATTTTTAAGCAATTGTCACAAAGCATTGCCGCCAAATGGGAAGGTTATTATTATGGAGTTCATAACACCTGAAGAACCAGAGCCAACAGAAGCATCCCAACTTCTTTCCACTATTGACAACCTCATGTTTATCACAGTTGGTGGAAGGGAAAGAACTCAGAAACAATATGAGAATTTGTGCAAGTTATCTGGATTTTCAAAATTTCATGTTGCTTGTTTGGCCTTTTCTACTTTCGGAGTGATGGAATTTTATAAATGA 1005 0.405 MGDSCSFNKDITCSEKTEDGAHLSAMLLSTNLVYSSVLNAAIDLNLFDIIAKATPPGSFISSSQIASKMPLQNQHKDLPNRLDRMLRMLASYNILTFATRPTQNGTTERVYGLSQVGKHFVPDDTKGNNASFVSYLSYPALLQVWLNFKEAVINEDIDLFKKLHGVTVYEYMDKDPKLSYIFNKAMADMSTKVMEKVLDTYTGFEGISTLVDVGGIEHVGGDMFASVPQGDAMLLKSICHNWSDEKCIEFLSNCHKALPPNGKVIIMEFITPEEPEPTEASQLLSTIDNLMFITVGGRERTQKQYENLCKLSGFSKFHVACLAFSTFGVMEFYK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi85g00019 334 PIRSF O-mtase 4 216 IPR016461 GO:0008168
Sebi85g00019 334 PIRSF O-mtase 214 334 IPR016461 GO:0008168
Sebi85g00019 334 Gene3D Vaccinia Virus protein VP39 216 322 IPR029063 -
Sebi85g00019 334 PANTHER O-METHYLTRANSFERASE 26 215 IPR016461 GO:0008168
Sebi85g00019 334 SUPERFAMILY "Winged helix" DNA-binding domain 19 124 IPR036390 -
Sebi85g00019 334 Pfam Dimerisation domain 37 90 IPR012967 GO:0046983
Sebi85g00019 334 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 334 IPR016461 GO:0008168
Sebi85g00019 334 FunFam Caffeic acid 3-O-methyltransferase 5 120 - -
Sebi85g00019 334 Gene3D Vaccinia Virus protein VP39 122 215 IPR029063 -
Sebi85g00019 334 Gene3D - 3 120 IPR036388 -
Sebi85g00019 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 332 IPR029063 -
Sebi85g00019 334 Pfam O-methyltransferase domain 216 315 IPR001077 GO:0008171
Sebi85g00019 334 Pfam O-methyltransferase domain 145 215 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi85g00019 Sebi-Chr85 298421 299843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi85g00019 11 326 Monolignol Biosynthesis Gene Families AT5G54160 38.068 3.86e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi85g00019 - - gmx:100787536 465.692